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PLM3_30_b1_sep16_scaffold_2310

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2310_1
unknown

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2..100
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2310_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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78..986
DNA (909bp) protein (303aa)
Uncharacterized protein Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FX15_PELBH
amidohydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_30_b1_sep16_scaffold_2310_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1100..2602
DNA (1503bp) protein (501aa)
hypothetical protein Tax=Microbacterium sp. 11MF RepID=UPI00037E1DC5
Uncharacterized protein {ECO:0000313|EMBL:KKB09297.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
family 5 extracellular solute-binding protein
PLM3_30_b1_sep16_scaffold_2310_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2644..4719)
DNA (2076bp) protein (692aa)
oppD; Glutathione import ATP-binding protein gsiA (EC:3.6.3.-)
Glutathione import ATP-binding protein gsiA Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SIU0_ACTS5
Uncharacterized protein {ECO:0000313|EMBL:KKB09309.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
PLM3_30_b1_sep16_scaffold_2310_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4735..5583)
DNA (849bp) protein (283aa)
hypothetical protein Tax=Microbacterium sp. 11MF RepID=UPI00035C8219
Uncharacterized protein {ECO:0000313|EMBL:KKB09308.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
binding-protein-dependent transport system inner membrane protein
PLM3_30_b1_sep16_scaffold_2310_6
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5580..6497)
DNA (918bp) protein (306aa)
hypothetical protein Tax=Microbacterium sp. 11MF RepID=UPI00035FE818
ABC transporter permease {ECO:0000313|EMBL:KGM47851.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
binding-protein-dependent transport systems inner membrane component
PLM3_30_b1_sep16_scaffold_2310_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7349..8257
DNA (909bp) protein (303aa)
Carboxyvinyl-carboxyphosphonate phosphorylmutase Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IWR7_METNO
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:ETR78722.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
carboxyvinyl-carboxyphosphonate phosphorylmutase
PLM3_30_b1_sep16_scaffold_2310_8
bacterium YEK0313, Bacteria

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8260..8964
DNA (705bp) protein (235aa)
Isochorismatase hydrolase Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IWR6_METNO
Maleamate amidohydrolase {ECO:0000313|EMBL:CEJ14726.1}; species="Bacteria.;" source="bacterium YEK0313.;"
isochorismatase hydrolase
PLM3_30_b1_sep16_scaffold_2310_9
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9091..10317
DNA (1227bp) protein (409aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IWQ9_METNO
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:ACL62950.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PLM3_30_b1_sep16_scaffold_2310_10
bacterium YEK0313, Bacteria

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10314..11690
DNA (1377bp) protein (459aa)
MmgE/PrpD family protein Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IWQ8_METNO
MmgE/PrpD family protein {ECO:0000313|EMBL:CEJ14718.1}; species="Bacteria.;" source="bacterium YEK0313.;"
MmgE/PrpD family protein
PLM3_30_b1_sep16_scaffold_2310_11
bacterium YEK0313, Bacteria

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11826..12998
DNA (1173bp) protein (391aa)
amidohydrolase (EC:3.5.2.2)
Amidohydrolase Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IWQ7_METNO
Allantoinase {ECO:0000313|EMBL:CEJ14717.1}; species="Bacteria.;" source="bacterium YEK0313.;"
PLM3_30_b1_sep16_scaffold_2310_12
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12995..14278)
DNA (1284bp) protein (428aa)
Amidase Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IBA5_AZOC5
Amidase {ECO:0000313|EMBL:KJR64136.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
amidase
PLM3_30_b1_sep16_scaffold_2310_13
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14275..15921)
DNA (1647bp) protein (549aa)
Amidase Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IBA1_AZOC5
amidase
Amidase {ECO:0000313|EMBL:BAF88630.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
PLM3_30_b1_sep16_scaffold_2310_14
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15918..16823)
DNA (906bp) protein (302aa)
Chitooligosaccharide deacetylase Tax=alpha proteobacterium BAL199 RepID=A8TNF5_9PROT
Chitooligosaccharide deacetylase {ECO:0000313|EMBL:EDP65342.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
polysaccharide deacetylase
PLM3_30_b1_sep16_scaffold_2310_15
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16823..17755)
DNA (933bp) protein (311aa)
Polysaccharide deacetylase family protein Tax=alpha proteobacterium BAL199 RepID=A8TNF6_9PROT
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EDP65343.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
polysaccharide deacetylase family protein
PLM3_30_b1_sep16_scaffold_2310_16
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17797..19062)
DNA (1266bp) protein (422aa)
Nitroreductase Tax=alpha proteobacterium BAL199 RepID=A8TNF8_9PROT
Nitroreductase {ECO:0000313|EMBL:EDP65345.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
nitroreductase
PLM3_30_b1_sep16_scaffold_2310_17
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19228..20394
DNA (1167bp) protein (389aa)
Extracellular ligand-binding receptor Tax=Burkholderia sp. YI23 RepID=G8MGM9_9BURK
ABC-type branched-chain amino acid transport system, periplasmic component protein {ECO:0000313|EMBL:ETY83559.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
extracellular ligand-binding receptor
PLM3_30_b1_sep16_scaffold_2310_18
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20465..21334
DNA (870bp) protein (290aa)
Branched-chain amino acid transport system permease protein Tax=Burkholderia sp. YI23 RepID=G8MGM8_9BURK
branched-chain amino acid transport system permease
Branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:BAO90149.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
PLM3_30_b1_sep16_scaffold_2310_19
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21367..22368
DNA (1002bp) protein (334aa)
Leucine/isoleucine/valine transporter permease subunit (Transmembrane abc transporter) Tax=Burkholderia sp. YI23 RepID=G8MGM7_9BURK
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:ETY83557.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
leucine/isoleucine/valine transporter permease subunit transmembrane abc transporter
PLM3_30_b1_sep16_scaffold_2310_20
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22365..23138
DNA (774bp) protein (258aa)
Branched-chain amino acid ABC transporter, ATP-binding protein Tax=Burkholderia sp. YI23 RepID=G8MGM6_9BURK
branched-chain amino acid ABC transporter ATP-binding protein
Branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AET92743.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
PLM3_30_b1_sep16_scaffold_2310_21
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23125..23835
DNA (711bp) protein (237aa)
Putative uncharacterized protein Tax=Burkholderia sp. YI23 RepID=G8MGM5_9BURK
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) {ECO:0000313|EMBL:CDY78514.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2310_22
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23855..24748)
DNA (894bp) protein (298aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TNG6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP65353.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
polysaccharide deacetylase
PLM3_30_b1_sep16_scaffold_2310_23
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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24845..25615
DNA (771bp) protein (257aa)
GntR family transcriptional regulator Tax=Alcanivorax pacificus W11-5 RepID=K2FZG9_9GAMM
GntR family transcriptional regulator
Putative propionate catabolism operon transcriptional regulator of GntR family {ECO:0000313|EMBL:KIV74129.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FeS53a.;"
PLM3_30_b1_sep16_scaffold_2310_24
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25619..27016
DNA (1398bp) protein (466aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TNG4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP65351.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
MmgE/PrpD family protein
PLM3_30_b1_sep16_scaffold_2310_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(27112..27423)
DNA (312bp) protein (104aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002891EE8
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_30_b1_sep16_scaffold_2310_26
unknown

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27701..28249
DNA (549bp) protein (183aa)

This feature has no annotations

Displaying 26 items

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