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PLM3_30_b1_sep16_scaffold_2372

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2372_1
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..365
DNA (363bp) protein (121aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
Beta-glucosidase-like glycosyl hydrolase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C243_DESTA
beta-glucosidase-like glycosyl hydrolase
PLM3_30_b1_sep16_scaffold_2372_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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483..3374
DNA (2892bp) protein (964aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21B76_RHOPB
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABD86360.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM3_30_b1_sep16_scaffold_2372_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3453..4076)
DNA (624bp) protein (208aa)
UPF0301 protein A33M_1497 Tax=Rhodovulum sp. PH10 RepID=J6JCI6_9RHOB
UPF0301 protein A33M_1497 {ECO:0000256|HAMAP-Rule:MF_00758}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2372_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4182..5012
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J6UGF3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW12936.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2372_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5076..5561
DNA (486bp) protein (162aa)
hypothetical protein Tax=Methyloferula stellata RepID=UPI0003758E9B
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Malallergen {ECO:0000313|EMBL:KFC75281.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
redoxin domain-containing protein
PLM3_30_b1_sep16_scaffold_2372_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5783..6946
DNA (1164bp) protein (388aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI0003055EB3
Uncharacterized protein {ECO:0000313|EMBL:EKS36172.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2372_7
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6901..7368)
DNA (468bp) protein (156aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
RNaseH ribonuclease Tax=Afipia birgiae RepID=UPI00035D66E1
ribonuclease H
PLM3_30_b1_sep16_scaffold_2372_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7365..8330)
DNA (966bp) protein (322aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase Tax=Afipia broomeae ATCC 49717 RepID=K8P3F7_9BRAD
PLM3_30_b1_sep16_scaffold_2372_9
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8524..9219
DNA (696bp) protein (232aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J5PLP1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11592.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2372_10
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9569..10576
DNA (1008bp) protein (336aa)
Uncharacterized protein Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXG9_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS64602.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Displaying 10 items

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