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PLM3_30_b1_sep16_scaffold_2506

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2506_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(293..910)
DNA (618bp) protein (206aa)
Aspartyl/Asparaginyl beta-hydroxylase Tax=Caulobacter sp. AP07 RepID=J2PGL5_9CAUL
Aspartyl/Asparaginyl beta-hydroxylase {ECO:0000313|EMBL:EJL26427.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
Aspartyl/Asparaginyl beta-hydroxylase
PLM3_30_b1_sep16_scaffold_2506_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(915..2006)
DNA (1092bp) protein (364aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase ATPase subunit Tax=Rhodovulum sp. PH10 RepID=J5PQL4_9RHOB
PLM3_30_b1_sep16_scaffold_2506_3
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2003..2491)
DNA (489bp) protein (163aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Bradyrhizobium sp. STM 3809 RepID=H0SYE3_9BRAD
PLM3_30_b1_sep16_scaffold_2506_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2616..3329
DNA (714bp) protein (238aa)
Diguanylate cyclase (GGDEF) domain-containing protein Tax=Afipia broomeae ATCC 49717 RepID=K8P8A2_9BRAD
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS37024.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2506_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3340..3564)
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=Nitrobacter sp. Nb-311A RepID=A3WYF6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34982.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2506_6
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3761..3946
DNA (186bp) protein (62aa)
Uncharacterized protein Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IUJ6_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL57064.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PLM3_30_b1_sep16_scaffold_2506_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4095..5057
DNA (963bp) protein (321aa)
Uncharacterized protein Tax=Ralstonia sp. PBA RepID=I9W8U2_9RALS
MFS transporter {ECO:0000313|EMBL:ETR78337.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2506_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5061..6026
DNA (966bp) protein (322aa)
Putative uncharacterized protein Tax=Delftia sp. (strain Cs1-4) RepID=F6AQ70_DELSC
MFS transporter {ECO:0000313|EMBL:ETR78337.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2506_9
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6097..7263
DNA (1167bp) protein (389aa)
Transporter, major facilitator family protein Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUG5_9PROT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHM03349.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
arabinose ABC transporter permease
PLM3_30_b1_sep16_scaffold_2506_10
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7275..8903
DNA (1629bp) protein (543aa)
betA; choline dehydrogenase (EC:1.1.99.1)
Choline dehydrogenase, a flavoprotein alcohol dehydrogenase {ECO:0000313|EMBL:CAL75744.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CAL75744.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
Choline dehydrogenase, a flavoprotein alcohol dehydrogenase Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YPB8_BRASO
PLM3_30_b1_sep16_scaffold_2506_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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8900..9343
DNA (444bp) protein (148aa)
betA; choline dehydrogenase (EC:1.1.99.1)
choline dehydrogenase Tax=Bradyrhizobium japonicum RepID=UPI0003816E9A
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Displaying 11 items

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