ggKbase home page

PLM3_30_b1_sep16_scaffold_2792

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2792_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1463
DNA (1461bp) protein (487aa)
Bradyrhizobium elkanii strain UASWS1015 Contig183, whole genome shotgun sequence {ECO:0000313|EMBL:KIU45784.1}; EC=3.5.2.2 {ECO:0000313|EMBL:KIU45784.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
phenylhydantoinase (EC:3.5.2.2)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00037F2394
PLM3_30_b1_sep16_scaffold_2792_2
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1472..3151
DNA (1680bp) protein (560aa)
FAD binding domain protein Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7W1_9PROT
FAD binding domain protein {ECO:0000313|EMBL:EHL96204.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2792_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3084..4352)
DNA (1269bp) protein (423aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037C22FF
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_30_b1_sep16_scaffold_2792_4
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4494..5921
DNA (1428bp) protein (476aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:BAQ15728.1}; EC=2.7.7.22 {ECO:0000313|EMBL:BAQ15728.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
mannose-1-phosphate guanylyltransferase Tax=Methylocystis parvus RepID=UPI0003666E50
PLM3_30_b1_sep16_scaffold_2792_5
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6065..6289
DNA (225bp) protein (75aa)
transporter Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4486A
dodecin
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
PLM3_30_b1_sep16_scaffold_2792_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6372..6854
DNA (483bp) protein (161aa)
Competence/damage-inducible protein cinA Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132Z7_RHOPS
CinA-like protein
Competence/damage-inducible protein cinA {ECO:0000313|EMBL:ABE40842.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
PLM3_30_b1_sep16_scaffold_2792_7
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6856..7269)
DNA (414bp) protein (138aa)
hypothetical protein Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003692F27
cyclophilin-like superfamily protein
Cyclophilin-like superfamily protein {ECO:0000313|EMBL:AJY44964.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
PLM3_30_b1_sep16_scaffold_2792_8
unknown

Not on your lists

comp(7350..7562)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2792_trna_1
unknown

Not on your lists

comp(7734..7805)
DNA (72bp)
transferRNA Gln
PLM3_30_b1_sep16_scaffold_2792_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7867..8913)
DNA (1047bp) protein (349aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI000374400C
glycosyl transferase, group 1
Glycosyl transferase, group 1 {ECO:0000313|EMBL:CCD04055.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM3_30_b1_sep16_scaffold_2792_10
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8923..11010)
DNA (2088bp) protein (696aa)
Glycosyl transferase family 2 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHT1_METS4
glycosyl transferase family protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACA14886.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
PLM3_30_b1_sep16_scaffold_2792_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11128..12060
DNA (933bp) protein (311aa)
Glycosyl transferase-like protein Tax=Azospirillum brasilense Sp245 RepID=G8B1G1_AZOBR
glycosyl transferase-like protein
Glycosyl transferase-like protein {ECO:0000313|EMBL:CCD04020.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM3_30_b1_sep16_scaffold_2792_12
unknown

Not on your lists

12120..12203
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 13 items

View Taxonomy