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PLM3_30_b1_sep16_scaffold_2869

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2869_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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21..320
DNA (300bp) protein (100aa)
Exodeoxyribonuclease III Tax=Rhodovulum sp. PH10 RepID=J5PCE9_9RHOB
Exodeoxyribonuclease III Xth
Exodeoxyribonuclease III {ECO:0000313|EMBL:EJW09752.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
PLM3_30_b1_sep16_scaffold_2869_2
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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329..682
DNA (354bp) protein (118aa)
mannose-6-phosphate isomerase Tax=Bradyrhizobium elkanii RepID=UPI00035EF487
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:KJC51231.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2869_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(713..1201)
DNA (489bp) protein (163aa)
Putative uncharacterized protein Tax=Hylemonella gracilis ATCC 19624 RepID=F3KX99_9BURK
Membrane protein {ECO:0000313|EMBL:ETR74878.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2869_4

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comp(1307..1600)
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Caenispirillum salinarum AK4 RepID=K9GYT8_9PROT
Marine sediment metagenome DNA, contig: S01H1_S00101 {ECO:0000313|EMBL:GAF97695.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2869_5
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1597..2058)
DNA (462bp) protein (154aa)
cAMP-dependent protein kinase Tax=Rhodovulum sp. PH10 RepID=J5PRB0_9RHOB
cAMP-dependent protein kinase {ECO:0000313|EMBL:EJW12632.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
putative Crp/Fnr family transcriptional regulator
PLM3_30_b1_sep16_scaffold_2869_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2078..2764)
DNA (687bp) protein (229aa)
DNA-binding response regulator Tax=Rhodovulum sp. PH10 RepID=J6LIF5_9RHOB
DNA-binding response regulator {ECO:0000313|EMBL:EJW12633.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
two component transcriptional regulator
PLM3_30_b1_sep16_scaffold_2869_7
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2871..3398
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E8H9_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ32473.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
PLM3_30_b1_sep16_scaffold_2869_8
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3554..4267)
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E8H7_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ32471.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
PLM3_30_b1_sep16_scaffold_2869_9
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4362..5606
DNA (1245bp) protein (415aa)
Major facilitator superfamily MFS_1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBX1_METNO
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACL61153.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PLM3_30_b1_sep16_scaffold_2869_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5603..6613)
DNA (1011bp) protein (337aa)
hypothetical protein Tax=Burkholderia sp. WSM4176 RepID=UPI00036F63BE
Uncharacterized protein {ECO:0000313|EMBL:KJB91822.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
tauA; periplasmic substrate-binding protein
PLM3_30_b1_sep16_scaffold_2869_11
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6768..7556
DNA (789bp) protein (263aa)
Aldolase Tax=Ralstonia pickettii DTP0602 RepID=U3QMH0_RALPI
aldolase
Aldolase {ECO:0000313|EMBL:AGW90441.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
PLM3_30_b1_sep16_scaffold_2869_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7826..8704
DNA (879bp) protein (293aa)
Putative transposase Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGR0_NITHX
transposase
Putative transposase {ECO:0000313|EMBL:ABE64587.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 12 items

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