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PLM3_30_b1_sep16_scaffold_22605

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_22605_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..357
DNA (357bp) protein (119aa)
Chemotaxis protein CheV Tax=Rhodovulum sp. PH10 RepID=J6LGF2_9RHOB
Chemotaxis protein CheV {ECO:0000313|EMBL:EJW12068.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
response regulator receiver protein
PLM3_30_b1_sep16_scaffold_22605_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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364..1737
DNA (1374bp) protein (458aa)
Response regulator receiver modulated diguanylate cyclase Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IXE2_RHOP2
pleD; response regulator PleD
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:ABD07118.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_30_b1_sep16_scaffold_22605_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2270..2464)
DNA (195bp) protein (65aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TSZ4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP64391.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
signal peptide
PLM3_30_b1_sep16_scaffold_22605_4

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comp(2461..2700)
DNA (240bp) protein (80aa)
Secreted protein containing DUF1791 Tax=uncultured bacterium ws406H10 RepID=I1X5F1_9BACT
Secreted protein containing DUF1791 {ECO:0000313|EMBL:AFI78726.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium ws406H10.;"
protein of unknown function DUF1791
PLM3_30_b1_sep16_scaffold_22605_5
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2812..2979)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A9P1_STAND
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
PLM3_30_b1_sep16_scaffold_22605_6
unknown

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comp(3050..3253)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_22605_7
bacterium YEK0313, Bacteria

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comp(3466..4197)
DNA (732bp) protein (244aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI00031B4351
NUDIX domain protein {ECO:0000313|EMBL:CEJ13181.1}; species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_22605_8
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4190..5407)
DNA (1218bp) protein (406aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
exoribonuclease R (EC:3.1.13.1)
Ribonuclease R Tax=Rhodovulum sp. PH10 RepID=J6UFM4_9RHOB
Displaying 8 items

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