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PLM3_30_b1_sep16_scaffold_11639

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_11639_1
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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639..1589
DNA (951bp) protein (317aa)
Putative acetyl-CoA acetyltransferase (PhbA/atoB/paaJ-like) {ECO:0000313|EMBL:CCE08632.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCE08632.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
beta-ketoadipyl CoA thiolase (EC:2.3.1.-)
acetyl-CoA acetyltransferase Tax=Bradyrhizobium japonicum RepID=UPI00038069D6
PLM3_30_b1_sep16_scaffold_11639_2
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1690..3924)
DNA (2235bp) protein (745aa)
Isoquinoline 1-oxidoreductase {ECO:0000313|EMBL:ACB78423.1}; EC=1.3.99.16 {ECO:0000313|EMBL:ACB78423.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
isoquinoline 1-oxidoreductase subunit beta Tax=Methylobacterium sp. MB200 RepID=UPI000346AF50
isoquinoline 1-oxidoreductase
PLM3_30_b1_sep16_scaffold_11639_3
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3938..4396)
DNA (459bp) protein (153aa)
Isoquinoline 1-oxidoreductase subunit alpha Tax=Oligotropha carboxidovorans RepID=B6JJL7_OLICO
isoquinoline 1-oxidoreductase subunit alpha IorA
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ACK52278.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
PLM3_30_b1_sep16_scaffold_11639_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4543..5022)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZIA7_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS91263.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
PLM3_30_b1_sep16_scaffold_11639_5
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5119..5484
DNA (366bp) protein (122aa)
ligI; 2-pyrone-4,6-dicarboxylic acid hydrolase (EC:3.1.1.57)
2-pyrone-4,6-dicarboxylic acid hydrolase {ECO:0000313|EMBL:CCQ74515.1}; EC=3.1.1.57 {ECO:0000313|EMBL:CCQ74515.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
2-pyrone-4,6-dicarboxylic acid hydrolase Tax=Azospirillum brasilense Sp245 RepID=G8AX39_AZOBR
PLM3_30_b1_sep16_scaffold_11639_6
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5514..5900
DNA (387bp) protein (129aa)
2-pyrone-4,6-dicarboxylic acid hydrolase Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VMX3_9RHOB
2-pyrone-4,6-dicarboxylate hydrolase {ECO:0000313|EMBL:KJS37838.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
2-pyrone-4,6-dicarboxylate hydrolase
PLM3_30_b1_sep16_scaffold_11639_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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6099..6602
DNA (504bp) protein (168aa)
Protocatechuate 4,5-dioxygenase alpha chain (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase, alpha subunit Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B077_9RHOB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_30_b1_sep16_scaffold_11639_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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6606..7520
DNA (915bp) protein (305aa)
ligB; Protocatechuate 4,5-dioxygenase, beta chain (EC:1.13.11.8)
protocatechuate 3,4-dioxygenase subunit beta Tax=Thiothrix flexilis RepID=UPI0003648F7A
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_30_b1_sep16_scaffold_11639_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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7517..8473
DNA (957bp) protein (319aa)
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase Tax=gamma proteobacterium NOR5-3 RepID=B8KG75_9GAMM
ligC; 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_30_b1_sep16_scaffold_11639_10
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8752..9873
DNA (1122bp) protein (374aa)
ABC-type branched-chain amino acid transport system, periplasmic component Tax=Bradyrhizobium sp. WSM1253 RepID=I2QRG2_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig179, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47794.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
twin-arginine translocation pathway signal
PLM3_30_b1_sep16_scaffold_11639_11
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10023..10883
DNA (861bp) protein (287aa)
Putative high-affinity branched-chain amino acid transport system permease protein Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z596_9BRAD
putative high-affinity branched-chain amino acid transport system permease protein
Putative high-affinity branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:BAM88449.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
PLM3_30_b1_sep16_scaffold_11639_12
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10897..12306
DNA (1410bp) protein (470aa)
Inner-membrane translocator Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07IU7_RHOP5
ABC transporter permease {ECO:0000313|EMBL:ETR76319.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
inner-membrane translocator
PLM3_30_b1_sep16_scaffold_11639_13
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12248..12631
DNA (384bp) protein (128aa)
ABC transporter ATP-binding protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HP0_BRADU
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAC51215.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
PLM3_30_b1_sep16_scaffold_11639_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12624..12902
DNA (279bp) protein (93aa)
ABC transporter related Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZR7_RHOP2
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABD06293.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Displaying 14 items

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