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PLM3_30_b1_sep16_scaffold_9398

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_9398_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1526
DNA (1524bp) protein (508aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI000361E97E
ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_30_b1_sep16_scaffold_9398_2
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1528..2301)
DNA (774bp) protein (258aa)
hypothetical protein Tax=Wenxinia marina RepID=UPI00036491AF
2-hydroxymuconic semialdehyde hydrolase
2-hydroxymuconic semialdehyde hydrolase {ECO:0000313|EMBL:CDN50870.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
PLM3_30_b1_sep16_scaffold_9398_3
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2306..3427)
DNA (1122bp) protein (374aa)
hypothetical protein
ABC-type branched-chain amino acid transport system, periplasmic component bin=GWC2_Methylomirabilis_70_16 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM3_30_b1_sep16_scaffold_9398_4
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3424..4161)
DNA (738bp) protein (246aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SHS2_THEM7
amino acid ABC transporter ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ADU50769.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
PLM3_30_b1_sep16_scaffold_9398_5
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4169..5743)
DNA (1575bp) protein (525aa)
Putative ABC tranpsorter Tax=Nitratireductor indicus C115 RepID=K2P7G8_9RHIZ
branched-chain amino acid transport system / permease component family protein
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:AJZ60680.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
PLM3_30_b1_sep16_scaffold_9398_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5745..6632)
DNA (888bp) protein (296aa)
Putative High-affinity branched-chain amino acid transport system permease protein bin=GWF2_Methylomirabilis_70_14 species=Nitratireductor indicus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_30_b1_sep16_scaffold_9398_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(6629..7411)
DNA (783bp) protein (261aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_30_b1_sep16_scaffold_9398_8
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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comp(7433..8419)
DNA (987bp) protein (329aa)
glycerate dehydrogenase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B60804
D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_30_b1_sep16_scaffold_9398_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8567..8875)
DNA (309bp) protein (103aa)
Putative oligopeptide ABC transporter (ATP-binding protein) Tax=Bradyrhizobium sp. ORS 375 RepID=H0SP92_9BRAD
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC57664.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
putative oligopeptide ABC transporter ATP-binding protein
PLM3_30_b1_sep16_scaffold_9398_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8875..9543)
DNA (669bp) protein (223aa)
Oligopeptide/dipeptide ABC transporter Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HXX0_AZOC5
oligopeptide/dipeptide ABC transporter
Oligopeptide/dipeptide ABC transporter {ECO:0000313|EMBL:BAF87547.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
PLM3_30_b1_sep16_scaffold_9398_11
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9540..10100)
DNA (561bp) protein (187aa)
Amidase Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HXX3_AZOC5
amidase
Amidase {ECO:0000313|EMBL:BAF87548.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
Displaying 11 items

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