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PLM3_30_b1_sep16_scaffold_6598

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_6598_1
unknown

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3..437
DNA (435bp) protein (145aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_6598_2
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

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449..868
DNA (420bp) protein (140aa)
dienelactone hydrolase
Dienelactone hydrolase bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
PLM3_30_b1_sep16_scaffold_6598_3
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

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811..1161
DNA (351bp) protein (117aa)
Dienelactone hydrolase bin=GWC2_Deltaproteobacteria_56_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
dienelactone hydrolase
Tax=GWB2_Nitrospirae_47_37_curated
PLM3_30_b1_sep16_scaffold_6598_4
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1182..1616
DNA (435bp) protein (145aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDF3_PHEZH
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACG78343.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
PLM3_30_b1_sep16_scaffold_6598_5
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1656..2189
DNA (534bp) protein (178aa)
Succinoglycan biosynthesis protein ExoI Tax=Rhizobium loti (strain MAFF303099) RepID=Q983X8_RHILO
succinoglycan biosynthesis protein EXOI
Succinoglycan biosynthesis protein ExoI {ECO:0000313|EMBL:BAB53752.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
PLM3_30_b1_sep16_scaffold_6598_6
unknown

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comp(2439..2651)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_6598_7
unknown

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2837..3472
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Methylosinus trichosporium OB3b RepID=D5QNU0_METTR
PLM3_30_b1_sep16_scaffold_6598_8
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3599..4315)
DNA (717bp) protein (239aa)
Probable extracellular solute-binding protein Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RH12_STRVP
probable extracellular solute-binding protein
Probable extracellular solute-binding protein {ECO:0000313|EMBL:CCA57340.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
PLM3_30_b1_sep16_scaffold_6598_9
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4330..5118)
DNA (789bp) protein (263aa)
Periplasmic component of an ABC type amino acid transport system-like protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXY4_RAMTT
amino acid ABC transporter substrate-binding protein
Periplasmic component of an ABC type amino acid transport system-like protein {ECO:0000313|EMBL:AEG93119.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
PLM3_30_b1_sep16_scaffold_6598_10
unknown

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5315..5491
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_6598_11
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6287..7171)
DNA (885bp) protein (295aa)
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (EC:1.14.11.-)
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003728880
Putative taurine catabolism dioxygenase {ECO:0000313|EMBL:EHR00703.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
PLM3_30_b1_sep16_scaffold_6598_12
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7252..7602)
DNA (351bp) protein (117aa)
cyclic nucleotide-binding protein, putative Tax=Verrucomicrobium spinosum RepID=UPI000174633E
Crp family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_30_b1_sep16_scaffold_6598_13
unknown

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comp(7744..7980)
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 13 items

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