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PLM3_30_b1_sep16_scaffold_3472

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_3472_1
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

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3..503
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WV59_MYCKA
Uncharacterized protein {ECO:0000313|EMBL:EYC28966.1}; species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma ceylanicum.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3472_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(603..1175)
DNA (573bp) protein (191aa)
Dna binding response regulator PrrA (RegA) Tax=Rhodovulum sp. PH10 RepID=J6L9J8_9RHOB
Dna binding response regulator PrrA (RegA) {ECO:0000313|EMBL:EJW10123.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
two component Fis family transcriptional regulator
PLM3_30_b1_sep16_scaffold_3472_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1200..1700)
DNA (501bp) protein (167aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Integral membrane sensor signal transduction histidine kinase Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0J8_STAND
PLM3_30_b1_sep16_scaffold_3472_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(1694..2479)
DNA (786bp) protein (262aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Putative sensory transduction histidine kinase Tax=uncultured Acidobacteria bacterium RepID=Q7X352_9BACT
PLM3_30_b1_sep16_scaffold_3472_5
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2634..3392
DNA (759bp) protein (253aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J6L9J2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10118.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
ABC transporter ATP-binding protein
PLM3_30_b1_sep16_scaffold_3472_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3389..4204
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J5PEA9_9RHOB
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
ABC transporter permease
PLM3_30_b1_sep16_scaffold_3472_7
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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4238..5653
DNA (1416bp) protein (472aa)
Putative intracellular PHB depolymerase Tax=uncultured Acidobacteria bacterium RepID=Q7X356_9BACT
Putative intracellular PHB depolymerase {ECO:0000313|EMBL:AAP58508.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
polyhydroxyalkanoate depolymerase, intracellular
PLM3_30_b1_sep16_scaffold_3472_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5705..6484
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Afipia sp. 1NLS2 RepID=D6V0I8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG10325.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
zinc metallopeptidase
PLM3_30_b1_sep16_scaffold_3472_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6564..8120)
DNA (1557bp) protein (519aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI0002D8EDEF
Uncharacterized protein {ECO:0000313|EMBL:EGP06284.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3472_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8241..9449
DNA (1209bp) protein (403aa)
Multidrug resistance transporter, Bcr/CflA family Tax=Rhodovulum sp. PH10 RepID=J5PJL8_9RHOB
Multidrug resistance transporter, Bcr/CflA family {ECO:0000313|EMBL:EJW11117.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
Bcr/CflA subfamily drug resistance transporter
PLM3_30_b1_sep16_scaffold_3472_11
unknown

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comp(9454..9684)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3472_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9954..11669
DNA (1716bp) protein (572aa)
penicillin-binding , 1A family domain protein (EC:2.4.1.129)
Uncharacterized protein Tax=Sphingobium japonicum BiD32 RepID=N1MPD7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CEG08487.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
Displaying 12 items

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