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PLM3_30_b1_sep16_scaffold_3981

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_3981_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..3070)
DNA (3069bp) protein (1023aa)
multidrug transporter Tax=Afipia birgiae RepID=UPI0003135A94
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EKS38126.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
acriflavin resistance protein
PLM3_30_b1_sep16_scaffold_3981_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3089..3949)
DNA (861bp) protein (287aa)
Putative Co/Zn/Cd efflux system membrane fusion protein Tax=Rhodovulum sp. PH10 PF6_9RHOB">RepID=J5PPF6_9RHOB
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:EJW12207.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
secretion protein HlyD
PLM3_30_b1_sep16_scaffold_3981_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4380..5177
DNA (798bp) protein (266aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EGP07583.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EGP07583.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Exodeoxyribonuclease III Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QML8_9BRAD
exodeoxyribonuclease III
PLM3_30_b1_sep16_scaffold_3981_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5196..6239)
DNA (1044bp) protein (348aa)
Putative Exopolysaccharide regulatory protein exoR Tax=Rhodovulum sp. PH10 RepID=J5PPG6_9RHOB
Putative Exopolysaccharide regulatory protein exoR {ECO:0000313|EMBL:EJW12212.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
Sel1 domain-containing protein repeat-containing protein
PLM3_30_b1_sep16_scaffold_3981_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6226..7950)
DNA (1725bp) protein (575aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Dihydroxy-acid dehydratase Tax=Afipia clevelandensis ATCC 49720 RepID=K8PHU3_9BRAD
hypothetical protein
PLM3_30_b1_sep16_scaffold_3981_6
unknown

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comp(8266..8484)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3981_7
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8662..10083)
DNA (1422bp) protein (474aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
Dihydrolipoyl dehydrogenase Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z860_9BRAD
dihydrolipoamide dehydrogenase
PLM3_30_b1_sep16_scaffold_3981_8
unknown

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comp(10188..10835)
DNA (648bp) protein (216aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_3981_9
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10850..11404)
DNA (555bp) protein (185aa)
Candidate extracytoplasmic binding receptor Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XW99_RAMTT
tctC; extracytoplasmic binding receptor
Candidate extracytoplasmic binding receptor {ECO:0000313|EMBL:AEG91669.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Displaying 9 items

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