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PLM3_30_b1_sep16_scaffold_10240

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_10240_1
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..1825)
DNA (1824bp) protein (608aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI000362B0EF
Contig19, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78224.1}; Flags: Fragment;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_10240_2
unknown

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1901..2047
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_10240_3
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2188..2514)
DNA (327bp) protein (109aa)
GTP-binding signal recognition particle Tax=Melioribacter roseus (strain P3M) RepID=I7A3Q8_MELRP
GTP-binding signal recognition particle
GTP-binding signal recognition particle {ECO:0000313|EMBL:AFN74521.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
PLM3_30_b1_sep16_scaffold_10240_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3057..4181)
DNA (1125bp) protein (375aa)
Cystathionine gamma-lyase {ECO:0000313|EMBL:AEW03211.1}; EC=4.4.1.1 {ECO:0000313|EMBL:AEW03211.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
O-succinylhomoserine sulfhydrylase Tax=Segetibacter koreensis RepID=UPI00035FA9E7
cystathionine gamma-lyase
PLM3_30_b1_sep16_scaffold_10240_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4276..4713)
DNA (438bp) protein (146aa)
OsmC family protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG3_NIAKG
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:AEW03210.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_10240_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4767..5786
DNA (1020bp) protein (340aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Homoserine O-acetyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG2_NIAKG
homoserine O-acetyltransferase
PLM3_30_b1_sep16_scaffold_10240_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5772..6782)
DNA (1011bp) protein (337aa)
Threonine synthase {ECO:0000313|EMBL:AEV96517.1}; EC=4.2.3.1 {ECO:0000313|EMBL:AEV96517.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Threonine synthase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK83_NIAKG
threonine synthase
PLM3_30_b1_sep16_scaffold_10240_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6937..7857)
DNA (921bp) protein (307aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Homoserine kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK82_NIAKG
homoserine kinase
PLM3_30_b1_sep16_scaffold_10240_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8160..9392)
DNA (1233bp) protein (411aa)
Aspartate kinase {ECO:0000313|EMBL:AEV96515.1}; EC=2.7.2.4 {ECO:0000313|EMBL:AEV96515.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aspartate kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK81_NIAKG
aspartate kinase
PLM3_30_b1_sep16_scaffold_10240_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9488..10486)
DNA (999bp) protein (333aa)
Aspartate kinase {ECO:0000313|EMBL:AEV96515.1}; EC=2.7.2.4 {ECO:0000313|EMBL:AEV96515.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aspartate kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK81_NIAKG
aspartate kinase
PLM3_30_b1_sep16_scaffold_10240_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11039..13615
DNA (2577bp) protein (859aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phosphoenolpyruvate carboxylase, type 1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK80_NIAKG
Phosphoenolpyruvate carboxylase, type 1
PLM3_30_b1_sep16_scaffold_10240_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(13735..14079)
DNA (345bp) protein (115aa)
Putative uncharacterized protein Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XXU1_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:KIC91741.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_10240_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14142..15095)
DNA (954bp) protein (318aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003829AC5
siroheme synthase
Siroheme synthase {ECO:0000313|EMBL:AEW03204.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_10240_14
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15286..16365)
DNA (1080bp) protein (360aa)
hypothetical protein Tax=Spirosoma luteum RepID=UPI000364D027
Putative TonB-linked outer membrane protein {ECO:0000313|EMBL:EDM38377.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
putative TonB-dependent outer membrane receptor protein
PLM3_30_b1_sep16_scaffold_10240_15
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(16307..18007)
DNA (1701bp) protein (567aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI000375E19A
putative TonB-dependent outer membrane receptor protein
Putative TonB-dependent outer membrane receptor protein {ECO:0000313|EMBL:AHJ97238.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
PLM3_30_b1_sep16_scaffold_10240_16
unknown

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comp(17991..18110)
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_10240_17
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(18144..18911)
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQ61_EMTOG
Protein of unknown function DUF2490
Uncharacterized protein {ECO:0000313|EMBL:AFK01814.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
PLM3_30_b1_sep16_scaffold_10240_18
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(18913..20484)
DNA (1572bp) protein (524aa)
Sulfite reductase (NADPH) {ECO:0000256|SAAS:SAAS00055561}; EC=1.8.1.2 {ECO:0000256|SAAS:SAAS00055561};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis R26.;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036AA181
Sulfite reductase [NADPH] hemoprotein beta-component
PLM3_30_b1_sep16_scaffold_10240_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(20656..21015)
DNA (360bp) protein (120aa)
NADPH--hemoprotein reductase {ECO:0000313|EMBL:AEW03202.1}; EC=1.6.2.4 {ECO:0000313|EMBL:AEW03202.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADPH--hemoprotein reductase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQF5_NIAKG
NADPH--hemoprotein reductase
PLM3_30_b1_sep16_scaffold_10240_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20954..21814)
DNA (861bp) protein (287aa)
NADPH--hemoprotein reductase {ECO:0000313|EMBL:AEW03202.1}; EC=1.6.2.4 {ECO:0000313|EMBL:AEW03202.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035ED05A
NADPH--hemoprotein reductase
Displaying 20 items

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