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PLM3_30_b1_sep16_scaffold_19408

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_19408_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..1390
DNA (1389bp) protein (463aa)
Beta-glucosidase {ECO:0000313|EMBL:AEW02328.1}; EC=3.2.1.21 {ECO:0000313|EMBL:AEW02328.1};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
JMB19063 Tax=compost metagenome RepID=UPI0002C86589
Beta-glucosidase
PLM3_30_b1_sep16_scaffold_19408_2
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1572..1880)
DNA (309bp) protein (103aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI0003795C64
30S ribosomal protein S23
30S ribosomal protein S23 {ECO:0000313|EMBL:AHW58889.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
PLM3_30_b1_sep16_scaffold_19408_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2614..3123
DNA (510bp) protein (170aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00035D1602
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Ribosome maturation factor rimP
PLM3_30_b1_sep16_scaffold_19408_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3286..3927
DNA (642bp) protein (214aa)
NusA antitermination factor Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W7_NIAKG
NusA antitermination factor
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_19408_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3969..4172
DNA (204bp) protein (68aa)
transcription elongation factor NusA Tax=Segetibacter koreensis RepID=UPI00035F9DA4
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
NusA antitermination factor
PLM3_30_b1_sep16_scaffold_19408_6
unknown

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4921..5253
DNA (333bp) protein (111aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_19408_7
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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5598..7163
DNA (1566bp) protein (522aa)
Translation initiation factor IF-2 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W6_NIAKG
Translation initiation factor IF-2 {ECO:0000313|EMBL:KIF28655.1}; Flags: Fragment;; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
translation initiation factor 2 (bIF-2)
PLM3_30_b1_sep16_scaffold_19408_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7441..8058
DNA (618bp) protein (206aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W5_NIAKG
PpiC-type peptidyl-prolyl cis-trans isomerase
PLM3_30_b1_sep16_scaffold_19408_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8039..8704
DNA (666bp) protein (222aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003788883
PpiC-type peptidyl-prolyl cis-trans isomerase
PLM3_30_b1_sep16_scaffold_19408_10
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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8936..9856
DNA (921bp) protein (307aa)
PAS domain S-box Tax=Thermus oshimai JL-2 RepID=K7RI34_THEOS
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AFV76077.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus oshimai JL-2.;"
Displaying 10 items

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