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PLM3_30_b1_sep16_scaffold_14191

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_14191_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..224)
DNA (222bp) protein (74aa)
membrane protein Tax=Niabella aurantiaca RepID=UPI0003817940
membrane protein
Membrane protein {ECO:0000313|EMBL:KIC90227.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PLM3_30_b1_sep16_scaffold_14191_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(286..591)
DNA (306bp) protein (102aa)
id=14426438 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_30_b1_sep16_scaffold_14191_3
unknown

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981..1166
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_14191_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1135..1941)
DNA (807bp) protein (269aa)
Dolichyl-phosphate beta-D-mannosyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI63_NIAKG
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:KIC90228.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
dolichyl-phosphate beta-D-mannosyltransferase
PLM3_30_b1_sep16_scaffold_14191_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2018..2788)
DNA (771bp) protein (257aa)
Exonuclease RNase T and DNA polymerase III Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI64_NIAKG
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KIC92931.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Exonuclease RNase T and DNA polymerase III
PLM3_30_b1_sep16_scaffold_14191_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2806..3498)
DNA (693bp) protein (231aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000313|EMBL:AEW00682.1}; EC=6.3.2.8 {ECO:0000313|EMBL:AEW00682.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-N-acetylmuramate--L-alanine ligase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI65_NIAKG
UDP-N-acetylmuramate--L-alanine ligase
PLM3_30_b1_sep16_scaffold_14191_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3492..4136)
DNA (645bp) protein (215aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000313|EMBL:AEW00682.1}; EC=6.3.2.8 {ECO:0000313|EMBL:AEW00682.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-N-acetylmuramate--L-alanine ligase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI65_NIAKG
UDP-N-acetylmuramate--L-alanine ligase
PLM3_30_b1_sep16_scaffold_14191_8
unknown

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4330..4464
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_14191_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4543..4872
DNA (330bp) protein (110aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003824E51
Uncharacterized protein {ECO:0000313|EMBL:GAO44270.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_14191_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4873..5748)
DNA (876bp) protein (292aa)
Putative lipoprotein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNS3_NIAKG
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AEW00999.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_14191_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5777..6502)
DNA (726bp) protein (242aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037ACAB5
Uncharacterized protein {ECO:0000313|EMBL:KIC90487.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
phosphoesterase PA-phosphatase
PLM3_30_b1_sep16_scaffold_14191_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7402..8538)
DNA (1137bp) protein (379aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
L-threonine ammonia-lyase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK74_NIAKG
L-threonine ammonia-lyase
PLM3_30_b1_sep16_scaffold_14191_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8641..9732)
DNA (1092bp) protein (364aa)
Ketol-acid reductoisomerase {ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|SAAS:SAAS00051427};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ketol-acid reductoisomerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK73_NIAKG
ketol-acid reductoisomerase
PLM3_30_b1_sep16_scaffold_14191_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10020..10610)
DNA (591bp) protein (197aa)
Acetolactate synthase, small subunit Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK72_NIAKG
Acetohydroxyacid synthase small subunit {ECO:0000313|EMBL:KIC95666.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
acetolactate synthase small subunit
PLM3_30_b1_sep16_scaffold_14191_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10708..12192)
DNA (1485bp) protein (495aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Acetolactate synthase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK70_NIAKG
acetolactate synthase, large subunit
Displaying 15 items

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