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PLM3_30_b1_sep16_scaffold_1338

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_1338_1
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..1133
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9F5_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52505.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
PLM3_30_b1_sep16_scaffold_1338_2
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1173..2129
DNA (957bp) protein (319aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KV00_SOLCM
5'-nucleotidase
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase {ECO:0000313|EMBL:AFD07700.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
PLM3_30_b1_sep16_scaffold_1338_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2918..3307
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC95820.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
PLM3_30_b1_sep16_scaffold_1338_4
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3428..4207)
DNA (780bp) protein (260aa)
Alkaline phosphatase Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YIW9_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD03686.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
PLM3_30_b1_sep16_scaffold_1338_5
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(4299..4754)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ14_OPITP
hypothetical protein
Tax=BJP_08E140C01_Anaerolineales_40_8
PLM3_30_b1_sep16_scaffold_1338_6
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4847..5959
DNA (1113bp) protein (371aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI00036AC96B
Uncharacterized protein {ECO:0000313|EMBL:EAZ82956.2}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1338_7
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5956..7074
DNA (1119bp) protein (373aa)
hypothetical protein Tax=Spirosoma luteum RepID=UPI00036D6ECB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE53665.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM3_30_b1_sep16_scaffold_1338_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7116..8126)
DNA (1011bp) protein (337aa)
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:CCH53596.1}; EC=3.1.1.- {ECO:0000313|EMBL:CCH53596.1};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Alpha/beta hydrolase fold-3 domain protein Tax=Fibrisoma limi BUZ 3 RepID=I2GI71_9BACT
esterase/lipase
PLM3_30_b1_sep16_scaffold_1338_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8189..9148)
DNA (960bp) protein (320aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase Tax=Xenococcus sp. PCC 7305 RepID=L8M9D6_9CYAN
Alcohol dehydrogenase {ECO:0000313|EMBL:KIC94490.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
zinc-binding oxidoreductase
PLM3_30_b1_sep16_scaffold_1338_10
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9605..9799)
DNA (195bp) protein (65aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXK3_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05299.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
PLM3_30_b1_sep16_scaffold_1338_11
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9836..10231)
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXK5_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05301.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
PLM3_30_b1_sep16_scaffold_1338_12
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10242..10679)
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXK6_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05302.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
PLM3_30_b1_sep16_scaffold_1338_13
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10837..11778
DNA (942bp) protein (314aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXK7_SOLCM
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:AFD05303.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
PLM3_30_b1_sep16_scaffold_1338_14
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11860..12282)
DNA (423bp) protein (141aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI00037E6E38
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEM72233.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
PLM3_30_b1_sep16_scaffold_1338_15
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12299..12769)
DNA (471bp) protein (157aa)
hypothetical protein Tax=Cytophaga aurantiaca RepID=UPI00038117F3
AraC family transcriptional regulator {ECO:0000313|EMBL:KFF06933.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
AraC family transcriptional regulator
PLM3_30_b1_sep16_scaffold_1338_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12845..13549)
DNA (705bp) protein (235aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000377C1A4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02748.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1338_17
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13580..14491)
DNA (912bp) protein (304aa)
Alpha/beta hydrolase fold protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDD5_CHIPD
Alpha/beta hydrolase {ECO:0000313|EMBL:KFF02944.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
alpha/beta hydrolase
PLM3_30_b1_sep16_scaffold_1338_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14704..15267
DNA (564bp) protein (188aa)
hypothetical protein Tax=Balneola vulgaris RepID=UPI00036E06E6
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENZ35888.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RNA polymerase sigma factor, sigma-70 family
PLM3_30_b1_sep16_scaffold_1338_19
unknown

Not on your lists

15236..15967
DNA (732bp) protein (244aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_1338_20
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15969..16379)
DNA (411bp) protein (137aa)
hypothetical protein FbacS_13100 Tax=Flavobacteriaceae bacterium S85 RepID=UPI000255A2DA bin=RAAC39 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
PLM3_30_b1_sep16_scaffold_1338_21
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16913..17257)
DNA (345bp) protein (115aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000379C0A5
Uncharacterized protein {ECO:0000313|EMBL:GAL63458.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
ribose 5-phosphate isomerase
PLM3_30_b1_sep16_scaffold_1338_22
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17273..17788)
DNA (516bp) protein (172aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037C9EBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD08603.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
PLM3_30_b1_sep16_scaffold_1338_23
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17845..18480)
DNA (636bp) protein (212aa)
hypothetical protein Tax=Polaribacter franzmannii RepID=UPI00035F51E9
Contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16896.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
beta-lactamase class C AmpC-like protein
Displaying 23 items

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