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PLM3_30_b1_sep16_scaffold_1742

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_1742_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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73..360
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP14_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03132.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1742_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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372..1196
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMB4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00896.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1742_3
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1240..2382
DNA (1143bp) protein (381aa)
Uncharacterized protein Tax=Indibacter alkaliphilus LW1 RepID=S2CWF0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD53730.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
PLM3_30_b1_sep16_scaffold_1742_4
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2479..3402)
DNA (924bp) protein (308aa)
Inner membrane protein YihY, formerly thought to be RNase BN Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GXG6_9SPHI
Inner membrane protein YihY, formerly thought to be RNase BN {ECO:0000313|EMBL:EOR96461.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
ribonuclease BN
PLM3_30_b1_sep16_scaffold_1742_5
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3541..4551
DNA (1011bp) protein (337aa)
hypothetical protein Tax=Lewinella persica RepID=UPI000363286E
Periplasmic protease {ECO:0000313|EMBL:EJL68297.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
C-terminal processing peptidase, peptidase S41 family
PLM3_30_b1_sep16_scaffold_1742_6
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4569..5474)
DNA (906bp) protein (302aa)
Xylose isomerase domain-containing protein TIM barrel Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQC1_EMTOG
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AFK01874.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
PLM3_30_b1_sep16_scaffold_1742_7
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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6037..7077
DNA (1041bp) protein (347aa)
Beta-lactamase-like bin=RBG_19FT_COMBO_GAL15_69_19 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
cyclase
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM3_30_b1_sep16_scaffold_1742_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7327..7737
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGB1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02750.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1742_9
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7757..8260
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L4S1_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE53019.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM3_30_b1_sep16_scaffold_1742_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8343..8798)
DNA (456bp) protein (152aa)
CBS domain containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGS1_NIAKG
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:AEV98513.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1742_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9442..10464
DNA (1023bp) protein (341aa)
Beta-lactamase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJM6_CHIPD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACU63786.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_1742_12
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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10629..11111
DNA (483bp) protein (161aa)
Nuclear protein SET Tax=Gloeocapsa sp. PCC 7428 RepID=K9X937_9CHRO
nuclear protein SET
Nuclear protein SET {ECO:0000313|EMBL:AFZ29150.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
PLM3_30_b1_sep16_scaffold_1742_13
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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11150..12151
DNA (1002bp) protein (334aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ET15_EMTOG
fumarate reductase/succinate dehydrogenase flavoprotein domain protein
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:AFK02818.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
PLM3_30_b1_sep16_scaffold_1742_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12254..12538)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKV6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99785.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1742_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12920..13744)
DNA (825bp) protein (275aa)
demethylmenaquinone methyltransferase (EC:2.1.1.-)
Methyltransferase Tax=Algoriphagus machipongonensis RepID=A3I2N4_9BACT
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:KIC93770.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
PLM3_30_b1_sep16_scaffold_1742_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13746..14405)
DNA (660bp) protein (220aa)
Putative uncharacterized protein Tax=Algoriphagus machipongonensis RepID=A3I2N3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC93771.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
OsmC family protein
PLM3_30_b1_sep16_scaffold_1742_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14613..14867)
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR49_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98963.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_1742_18
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(14978..15646)
DNA (669bp) protein (223aa)
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=Frankia sp. QA3 RepID=I8QLL0_9ACTO
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIV93322.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_1742_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15807..16778
DNA (972bp) protein (324aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA primase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR55_NIAKG
DNA primase
PLM3_30_b1_sep16_scaffold_1742_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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16891..17568
DNA (678bp) protein (226aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037C8A20
DNA primase
PLM3_30_b1_sep16_scaffold_1742_21
R_OD1_Yanofskybacteria_42_49, Yanofskybacteria, Parcubacteria, Bacteria

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comp(17626..18276)
DNA (651bp) protein (217aa)
Adenylate cyclase bin=GWF2_Ignavibacteria_35_20 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
adenylate cyclase
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_42_49_curated
Displaying 21 items

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