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PLM3_30_b1_sep16_scaffold_4195

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_4195_1
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..2594)
DNA (2592bp) protein (864aa)
Uncharacterized protein Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R086_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV33752.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
PLM3_30_b1_sep16_scaffold_4195_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2801..3163)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00236.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_4195_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3172..3750)
DNA (579bp) protein (193aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P2_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW00235.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_4195_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3935..4693
DNA (759bp) protein (253aa)
NLP/P60 protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUW0_CHIPD
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ACU62869.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_4195_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4677..5090)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Flavobacteria bacterium (strain BBFL7) RepID=Q26BZ0_FLABB
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_4195_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5116..5928)
DNA (813bp) protein (271aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Inorganic pyrophosphatase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9N8_NIAKG
inorganic pyrophosphatase
PLM3_30_b1_sep16_scaffold_4195_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5932..6330)
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9N7_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO43662.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_4195_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6441..7427)
DNA (987bp) protein (329aa)
PhoH family protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9N6_NIAKG
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:AEW00229.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_4195_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7598..7753)
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMU9_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60383.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_4195_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7705..9489)
DNA (1785bp) protein (595aa)
PKD domain containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THR4_NIAKG
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEV97492.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_4195_11
unknown

Not on your lists

comp(9505..9687)
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_4195_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9852..10640)
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Microscilla marina ATCC 23134 RepID=A1ZTY3_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_4195_13
unknown

Not on your lists

comp(10700..10948)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_4195_14
unknown

Not on your lists

11046..11423
DNA (378bp) protein (126aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_4195_15
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11420..11980)
DNA (561bp) protein (187aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI00036B807B
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AFK01784.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
PLM3_30_b1_sep16_scaffold_4195_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12013..12522)
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIX7_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60061.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_4195_17
unknown

Not on your lists

12773..12877
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_4195_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12826..14526)
DNA (1701bp) protein (567aa)
PKD domain containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB71_NIAKG
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEW02454.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_4195_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14601..15350)
DNA (750bp) protein (250aa)
PKD domain containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB71_NIAKG
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEW02454.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_4195_20
unknown

Not on your lists

15502..16113
DNA (612bp) protein (204aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_4195_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16172..18010
DNA (1839bp) protein (613aa)
Gamma-glutamyltransferase {ECO:0000313|EMBL:AEW00221.1}; EC=2.3.2.2 {ECO:0000313|EMBL:AEW00221.1};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Gamma-glutamyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9M8_NIAKG
gamma-glutamyltransferase
PLM3_30_b1_sep16_scaffold_4195_22
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18143..18976
DNA (834bp) protein (278aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI000360836E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42392.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
PLM3_30_b1_sep16_scaffold_4195_23
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19018..19854)
DNA (837bp) protein (279aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000382748A
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ADB37101.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
PLM3_30_b1_sep16_scaffold_4195_24
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19987..20439
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Fulvivirga imtechensis AK7 RepID=L8JZ22_9BACT
Membrane protein {ECO:0000313|EMBL:GAL86720.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_4195_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20596..20862
DNA (267bp) protein (89aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00036C513B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF16092.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
PLM3_30_b1_sep16_scaffold_4195_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21103..22533)
DNA (1431bp) protein (477aa)
FAD-binding protein Tax=Segetibacter koreensis RepID=UPI00035DC735
FAD-binding protein {ECO:0000313|EMBL:KIC94460.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
D-lactate dehydrogenase
PLM3_30_b1_sep16_scaffold_4195_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22543..23964)
DNA (1422bp) protein (474aa)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:AEW03019.1}; EC=1.1.2.4 {ECO:0000313|EMBL:AEW03019.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
FAD-binding protein Tax=Segetibacter koreensis RepID=UPI00035DC735
D-lactate dehydrogenase
PLM3_30_b1_sep16_scaffold_4195_28
unknown

Not on your lists

comp(23986..24141)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_4195_29
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24307..25356
DNA (1050bp) protein (350aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI000380897F
Uncharacterized protein {ECO:0000313|EMBL:GAO41568.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_4195_30
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25460..26335
DNA (876bp) protein (292aa)
Putative secreted hydrolase Tax=Flavobacteriales bacterium ALC-1 RepID=A8UEL6_9FLAO
metallo-beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Displaying items 1-30 of 50 in total

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