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PLM3_30_b1_sep16_scaffold_4514

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_4514_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..858)
DNA (858bp) protein (286aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEW03271.1}; EC=2.3.1.174 {ECO:0000313|EMBL:AEW03271.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Acetyl-CoA acetyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT6_NIAKG
acetyl-CoA acetyltransferase
PLM3_30_b1_sep16_scaffold_4514_2

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888..1391
DNA (504bp) protein (168aa)
Amidohydrolase family protein Tax=Algoriphagus machipongonensis RepID=A3HSE4_9BACT
amidohydrolase
Uncharacterized protein {ECO:0000313|EMBL:KKN28275.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_30_b1_sep16_scaffold_4514_3
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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1571..2197
DNA (627bp) protein (209aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI0003700BD7
amidohydrolase
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
PLM3_30_b1_sep16_scaffold_4514_4
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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2352..5387
DNA (3036bp) protein (1012aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI000378F700
signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PLM3_30_b1_sep16_scaffold_4514_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5393..6145
DNA (753bp) protein (251aa)
Two component transcriptional regulator, LytTR family Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W647_DYAFD
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACT92527.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
PLM3_30_b1_sep16_scaffold_4514_6
GWF2_CPR3_35_18, CPR3, Bacteria

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6254..7501
DNA (1248bp) protein (416aa)
Putative uncharacterized protein bin=GWF2_CPR3_35_18 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_CPR3_35_18 organism_group=CPR3
Uncharacterized protein {ECO:0000313|EMBL:KKP69518.1}; species="Bacteria; candidate division CPR3.;" source="candidate division CPR3 bacterium GW2011_GWF2_35_18.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_4514_7
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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7513..8466
DNA (954bp) protein (318aa)
IPT/TIG domain protein bin=GWD2_Bacteroidetes_33_33 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
BNR/Asp-box repeat domain protein
Tax=GWD2_Bacteroidetes_33_33_curated
PLM3_30_b1_sep16_scaffold_4514_8
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8477..10132
DNA (1656bp) protein (552aa)
IPT/TIG domain protein Tax=Microscilla marina ATCC 23134 RepID=A1ZHJ5_9BACT
IPT/TIG domain protein {ECO:0000313|EMBL:EAY30002.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
glycosyl hydrolase
PLM3_30_b1_sep16_scaffold_4514_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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10226..11590
DNA (1365bp) protein (455aa)
Putative uncharacterized protein Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVC9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96659.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
PLM3_30_b1_sep16_scaffold_4514_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11658..12710
DNA (1053bp) protein (351aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Probable dual-specificity RNA methyltransferase RlmN Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT3_NIAKG
23S rRNA m(2)A-2503 methyltransferase
PLM3_30_b1_sep16_scaffold_4514_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12862..13479
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03267.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_4514_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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13590..13832
DNA (243bp) protein (81aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Displaying 12 items

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