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PLM3_30_b1_sep16_scaffold_2111

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2111_1
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..1009)
DNA (1008bp) protein (336aa)
Response regulator receiver Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0G8_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:ETZ23653.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
response regulator receiver
PLM3_30_b1_sep16_scaffold_2111_2
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1194..4274
DNA (3081bp) protein (1027aa)
hypothetical protein Tax=Flavobacterium rivuli RepID=UPI000365EFE3
TonB-dependent receptor SusC {ECO:0000313|EMBL:KHJ39290.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
TonB-dependent outer membrane receptor
PLM3_30_b1_sep16_scaffold_2111_3
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4299..5852
DNA (1554bp) protein (518aa)
hypothetical protein Tax=Flavobacterium rivuli RepID=UPI0003792D72
SusD family protein {ECO:0000313|EMBL:KHJ39291.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
SusD/RagB family protein
PLM3_30_b1_sep16_scaffold_2111_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5943..7355
DNA (1413bp) protein (471aa)
Putative endo-arabinase Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XLS4_LEEBM
Endo-arabinase {ECO:0000313|EMBL:KIC89601.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
beta-xylosidase
PLM3_30_b1_sep16_scaffold_2111_5
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

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7649..11140
DNA (3492bp) protein (1164aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003646F7B
ASPIC/UnbV-like protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
PLM3_30_b1_sep16_scaffold_2111_6
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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11148..12752
DNA (1605bp) protein (535aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55)
alpha-N-arabinofuranosidase Tax=Anaerophaga thermohalophila RepID=UPI000237B92E
Tax=RBG_13_Planctomycetes_50_24_curated
PLM3_30_b1_sep16_scaffold_2111_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12783..14810
DNA (2028bp) protein (676aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037DBC61
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:KIC89600.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
alpha-L-arabinofuranosidase
PLM3_30_b1_sep16_scaffold_2111_8

Not on your lists

15287..16024
DNA (738bp) protein (246aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036B72E9
Tellurite resistance protein TerB {ECO:0000313|EMBL:AIA11160.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2111_9

Not on your lists

16083..16424
DNA (342bp) protein (114aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036436E3
Uncharacterized protein {ECO:0000313|EMBL:AIA11159.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transport-associated protein
PLM3_30_b1_sep16_scaffold_2111_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16430..16846
DNA (417bp) protein (139aa)
peptide-binding protein Tax=Segetibacter koreensis RepID=UPI00035DA19C
SH3 type 3 domain-containing protein
SH3 type 3 domain protein {ECO:0000313|EMBL:AEW02622.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2111_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(17059..18048)
DNA (990bp) protein (330aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037780EF
nucleoside hydrolase
Nucleoside hydrolase {ECO:0000313|EMBL:AKD53526.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
PLM3_30_b1_sep16_scaffold_2111_12
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

18181..19464
DNA (1284bp) protein (428aa)
Citrate transporter bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
citrate transporter
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PLM3_30_b1_sep16_scaffold_2111_13
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19640..20644)
DNA (1005bp) protein (335aa)
Thiamine biosynthesis lipoprotein apbE bin=GWF2_Bacteroidetes_35_48 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Membrane-associated lipoprotein involved in thiamine biosynthesis
Tax=GWF2_Bacteroidetes_35_48_curated
PLM3_30_b1_sep16_scaffold_2111_14
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20776..21426
DNA (651bp) protein (217aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000372B69E
Uncharacterized protein {ECO:0000313|EMBL:KIC89560.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2111_15
unknown

Not on your lists

21536..21703
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2111_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(21800..24145)
DNA (2346bp) protein (782aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PCH0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40929.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_30_b1_sep16_scaffold_2111_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24485..25492
DNA (1008bp) protein (336aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7C8_NIAKG
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
PLM3_30_b1_sep16_scaffold_2111_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25750..26631
DNA (882bp) protein (294aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
4-hydroxy-tetrahydrodipicolinate synthase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7C9_NIAKG
dihydrodipicolinate synthase
PLM3_30_b1_sep16_scaffold_2111_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26638..27135
DNA (498bp) protein (166aa)
alpha-dextrin endo-1,6-alpha-glucosidase (EC:3.2.1.41)
putative hydrolase of alpha/beta superfamily protein Tax=Pedobacter agri RepID=UPI00029A1258
Uncharacterized protein {ECO:0000313|EMBL:KIC93007.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
PLM3_30_b1_sep16_scaffold_2111_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27135..27650
DNA (516bp) protein (172aa)
putative hydrolase of alpha/beta superfamily protein Tax=Pedobacter agri RepID=UPI00029A1258
Uncharacterized protein {ECO:0000313|EMBL:KIC93007.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
esterase
PLM3_30_b1_sep16_scaffold_2111_21
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28007..28831
DNA (825bp) protein (275aa)
Transcriptional regulator, AraC family Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L565_HALH1
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEE48786.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM3_30_b1_sep16_scaffold_2111_22
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28940..29401
DNA (462bp) protein (154aa)
hypothetical protein Tax=Dyadobacter beijingensis RepID=UPI000376EC66
Uncharacterized protein {ECO:0000313|EMBL:GAO42229.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2111_23
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29410..30312)
DNA (903bp) protein (301aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Ribonuclease Z Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7D0_NIAKG
Ribonuclease Z
PLM3_30_b1_sep16_scaffold_2111_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30412..31332)
DNA (921bp) protein (307aa)
Fructosamine/Ketosamine-3-kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7D1_NIAKG
fructosamine/Ketosamine-3-kinase
Fructosamine/Ketosamine-3-kinase {ECO:0000313|EMBL:AEW01167.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2111_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31628..32005)
DNA (378bp) protein (126aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003667690
Anti-sigma-factor antagonist {ECO:0000313|EMBL:KIC93005.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
sulfate transporter/antisigma-factor antagonist STAS
PLM3_30_b1_sep16_scaffold_2111_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32099..34627
DNA (2529bp) protein (843aa)
ATPase AAA-2 domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNQ5_NIAKG
ATPase AAA-2 domain-containing protein
ATPase AAA-2 domain protein {ECO:0000313|EMBL:AEW00981.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2111_27
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34916..35614
DNA (699bp) protein (233aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000256|SAAS:SAAS00098295};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Cytidylate kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNQ4_NIAKG
cytidylate kinase
PLM3_30_b1_sep16_scaffold_2111_28
unknown

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35728..36213
DNA (486bp) protein (162aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2111_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36620..36973
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB60_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02443.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2111_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37034..37750)
DNA (717bp) protein (239aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003731359
cyclophilin type peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase cyclophilin type {ECO:0000313|EMBL:AEW02097.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 45 in total

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