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PLM3_30_b1_sep16_scaffold_2719

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2719_1
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3..461
DNA (459bp) protein (153aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000372744D
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AHM58376.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
3-oxoacyl-ACP reductase
PLM3_30_b1_sep16_scaffold_2719_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(476..784)
DNA (309bp) protein (103aa)
Antibiotic biosynthesis monooxygenase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T865_NIAKG
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AEV98016.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2719_3
unknown

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comp(1324..1470)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2719_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1835..2170
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPE0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96746.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2719_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2241..2486
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIZ2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97509.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2719_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(2624..3535)
DNA (912bp) protein (304aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EYK0_EMTOG
pyridoxal-5'-phosphate-dependent protein subunit beta
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_2719_7
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3651..4292)
DNA (642bp) protein (214aa)
Putative membrane protein hemolysin III Tax=Flavobacterium frigoris PS1 RepID=H7FWL8_9FLAO
Putative membrane protein hemolysin III {ECO:0000313|EMBL:EIA07097.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hemolysin III family channel protein
PLM3_30_b1_sep16_scaffold_2719_8
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4582..5028
DNA (447bp) protein (149aa)
VanZ-like protein Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LHA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ21885.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
VanZ family protein
PLM3_30_b1_sep16_scaffold_2719_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5032..5685)
DNA (654bp) protein (218aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8A6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99076.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2719_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5816..8269)
DNA (2454bp) protein (818aa)
peptidase S9 Tax=Pedobacter agri RepID=UPI000299E5E8
Uncharacterized protein {ECO:0000313|EMBL:KIC91495.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
PLM3_30_b1_sep16_scaffold_2719_11
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8303..9115)
DNA (813bp) protein (271aa)
Beta-glucanase/beta-glucan synthetase Tax=Chryseobacterium sp. CF314 RepID=J2K713_9FLAO
Beta-glucanase/beta-glucan synthetase {ECO:0000313|EMBL:EJL69003.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
beta-glucanase
PLM3_30_b1_sep16_scaffold_2719_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9381..10241
DNA (861bp) protein (287aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
ATP phosphoribosyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJK4_NIAKG
ATP phosphoribosyltransferase
PLM3_30_b1_sep16_scaffold_2719_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10356..11651
DNA (1296bp) protein (432aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000363C0DF
histidinol dehydrogenase
PLM3_30_b1_sep16_scaffold_2719_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11652..12713
DNA (1062bp) protein (354aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Histidinol-phosphate aminotransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJK6_NIAKG
histidinol-phosphate aminotransferase
PLM3_30_b1_sep16_scaffold_2719_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12739..14034
DNA (1296bp) protein (432aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000375D288
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:ACU61109.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_2719_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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14040..14504
DNA (465bp) protein (155aa)
Cytochrome c class I Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJK8_NIAKG
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AEW00755.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2719_17
unknown

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14501..14641
DNA (141bp) protein (47aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2719_18
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

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14628..15023
DNA (396bp) protein (132aa)
S23 ribosomal Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M1L5_ANAVT
S23 ribosomal protein
S23 ribosomal {ECO:0000313|EMBL:ABA25128.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
PLM3_30_b1_sep16_scaffold_2719_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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15114..16253
DNA (1140bp) protein (380aa)
Imidazoleglycerol-phosphate dehydratase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJK9_NIAKG
imidazoleglycerol-phosphate dehydratase
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2719_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16367..17509)
DNA (1143bp) protein (381aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TN22_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97707.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2719_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(17754..19007)
DNA (1254bp) protein (418aa)
Amidohydrolase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH0_NIAKG
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AEV97393.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 21 items

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