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PLM3_30_b1_sep16_scaffold_2882

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2882_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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57..377
DNA (321bp) protein (107aa)
Fe-S-cluster-containing hydrogenase Tax=Niabella aurantiaca RepID=UPI000377B5FE
Fe-S-cluster-containing hydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_2882_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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433..1029
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG41_CHIPD
Quinol:cytochrome C oxidoreductase {ECO:0000313|EMBL:KIC91103.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2882_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1053..1730
DNA (678bp) protein (226aa)
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF76_NIAKG
quinol:cytochrome c oxidoreductase monoheme cytochrome subunit
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit {ECO:0000313|EMBL:AEW02696.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2882_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1771..2994
DNA (1224bp) protein (408aa)
Quinol:cytochrome c oxidoreductase quinone-binding subunit 2 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF77_NIAKG
quinol:cytochrome c oxidoreductase quinone-binding subunit 2
Quinol:cytochrome c oxidoreductase quinone-binding subunit 2 {ECO:0000313|EMBL:AEW02697.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2882_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3038..4105
DNA (1068bp) protein (356aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Cytochrome c oxidase subunit 2 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF78_NIAKG
cytochrome c oxidase subunit II
PLM3_30_b1_sep16_scaffold_2882_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4152..5978
DNA (1827bp) protein (609aa)
Cytochrome c oxidase subunit I Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF79_NIAKG
Cytochrome C oxidase {ECO:0000313|EMBL:KIC96461.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
cytochrome c oxidase subunit I
PLM3_30_b1_sep16_scaffold_2882_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6094..6939
DNA (846bp) protein (282aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Protoheme IX farnesyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF80_NIAKG
Protoheme IX farnesyltransferase
PLM3_30_b1_sep16_scaffold_2882_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6951..7514
DNA (564bp) protein (188aa)
Cytochrome c oxidase subunit III Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF81_NIAKG
Cytochrome oxidase subunit III {ECO:0000313|EMBL:KIC96463.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
cytochrome c oxidase subunit III
PLM3_30_b1_sep16_scaffold_2882_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7558..8229
DNA (672bp) protein (224aa)
Cytochrome c oxidase subunit III Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF82_NIAKG
Cytochrome oxidase subunit III {ECO:0000313|EMBL:KIC96464.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
cytochrome c oxidase subunit III
PLM3_30_b1_sep16_scaffold_2882_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8248..8694
DNA (447bp) protein (149aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00036C8A13
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_2882_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8735..9370
DNA (636bp) protein (212aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037142B5
Electron transporter SenC {ECO:0000313|EMBL:KIC96465.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
electron transport protein SCO1/SenC
PLM3_30_b1_sep16_scaffold_2882_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9471..10022
DNA (552bp) protein (184aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00037B9816
Uncharacterized protein {ECO:0000313|EMBL:KIC96466.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2882_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10468..10860)
DNA (393bp) protein (131aa)
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG69_NIAKG
methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_2882_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10927..11676)
DNA (750bp) protein (250aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
tRNA (guanine-N(7)-)-methyltransferase Tax=Niabella soli DSM 19437 RepID=H1NT25_9SPHI
tRNA (guanine-N(7)-)-methyltransferase
PLM3_30_b1_sep16_scaffold_2882_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11707..13248
DNA (1542bp) protein (514aa)
FAD dependent oxidoreductase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPS1_CHIPD
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACU62481.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_2882_16
unknown

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comp(13851..13961)
DNA (111bp) protein (37aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2882_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14051..14536
DNA (486bp) protein (162aa)
Transcriptional regulator, AsnC family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG74_NIAKG
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AEW02713.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_2882_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14585..15001
DNA (417bp) protein (139aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC96472.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2882_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15013..15243)
DNA (231bp) protein (77aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000362C1F9
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEW02715.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 19 items

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