ggKbase home page

PLM3_30_b1_sep16_scaffold_11132

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_11132_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..466)
DNA (465bp) protein (155aa)
Ribulokinase {ECO:0000256|RuleBase:RU003455, ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|RuleBase:RU003455, ECO:0000256|SAAS:SAAS00183333};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ribulokinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPU0_NIAKG
L-ribulokinase
PLM3_30_b1_sep16_scaffold_11132_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(597..1274)
DNA (678bp) protein (226aa)
NUDIX hydrolase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH48_NIAKG
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEW00659.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_11132_3
unknown

Not on your lists

1381..1476
DNA (96bp) protein (32aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_11132_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1528..2571
DNA (1044bp) protein (348aa)
Sugar transporter Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TM78_NIAKG
sugar transporter
Sugar transporter {ECO:0000313|EMBL:AEV99851.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_11132_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2911..3927
DNA (1017bp) protein (339aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855, ECO:0000256|SAAS:SAAS00181223};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Fructose-1,6-bisphosphatase class 1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGK5_NIAKG
D-fructose 1,6-bisphosphatase
PLM3_30_b1_sep16_scaffold_11132_6
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3943..5220
DNA (1278bp) protein (426aa)
Uncharacterized protein Tax=Fibrella aestuarina BUZ 2 RepID=I0K6D1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETZ22767.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_11132_7
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5470..5817
DNA (348bp) protein (116aa)
Uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RBG_16_Ignavibacteria_35_7_curated
PLM3_30_b1_sep16_scaffold_11132_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6005..8371)
DNA (2367bp) protein (789aa)
TonB-denpendent receptor Tax=Cytophagales str. B6 RepID=UPI0003B69F47
Uncharacterized protein {ECO:0000313|EMBL:KIC91204.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TonB-dependent receptor
PLM3_30_b1_sep16_scaffold_11132_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8489..9481
DNA (993bp) protein (331aa)
Aldo/keto reductase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAQ1_CHIPD
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACU63015.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_11132_10
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

9986..10216
DNA (231bp) protein (77aa)
Putative uncharacterized protein bin=GWA1_Deltaproteobacteria_52_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=GWA1_Bdellovibrionales_52_35_curated
Displaying 10 items

View Taxonomy