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PLM3_30_b1_sep16_scaffold_3338

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_3338_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..734
DNA (732bp) protein (244aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Cellobiose 2-epimerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH40_NIAKG
N-acylglucosamine 2-epimerase
PLM3_30_b1_sep16_scaffold_3338_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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811..1689
DNA (879bp) protein (293aa)
Alpha-L-arabinofuranosidase-like protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJK9_CHIPD
alpha-L-arabinofuranosidase
Alpha-L-arabinofuranosidase-like protein {ECO:0000313|EMBL:ACU63769.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_3338_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1786..2538
DNA (753bp) protein (251aa)
Alpha-L-arabinofuranosidase-like protein Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0Q0_PALPW
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:KIC95877.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
alpha-L-arabinofuranosidase-like protein
PLM3_30_b1_sep16_scaffold_3338_4
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3140..3994)
DNA (855bp) protein (285aa)
hypothetical protein Tax=Paenibacillus sp. JC66 RepID=UPI0002882D38
Uncharacterized protein {ECO:0000313|EMBL:ETZ22709.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_3338_5
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(4061..4906)
DNA (846bp) protein (282aa)
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000256|RuleBase:RU362030}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362030};; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
Putative methyltransferase Tax=Mycobacterium phlei RIVM601174 RepID=I0RSI5_MYCPH
hypothetical protein
PLM3_30_b1_sep16_scaffold_3338_6
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5161..6747
DNA (1587bp) protein (529aa)
YdjC family protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L1A4_HALH1
hypothetical protein
YdjC family protein {ECO:0000313|EMBL:AEE52836.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM3_30_b1_sep16_scaffold_3338_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6826..8250
DNA (1425bp) protein (475aa)
Histidine kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEM3_NIAKG
Putative two-component hybrid sensor and regulator {ECO:0000313|EMBL:GAO42291.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
histidine kinase
PLM3_30_b1_sep16_scaffold_3338_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8253..10790
DNA (2538bp) protein (846aa)
Histidine kinase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJD4_CHIPD
Putative two-component hybrid sensor and regulator {ECO:0000313|EMBL:GAO42291.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
histidine kinase
PLM3_30_b1_sep16_scaffold_3338_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11003..13492
DNA (2490bp) protein (830aa)
collagen-binding protein Tax=Rudanella lutea RepID=UPI000366A9BE
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEW00663.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 9 items

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