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PLM3_30_b1_sep16_scaffold_306

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_306_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..1234
DNA (1233bp) protein (411aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA gyrase subunit A Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFI5_NIAKG
DNA gyrase subunit A
PLM3_30_b1_sep16_scaffold_306_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1258..2523
DNA (1266bp) protein (422aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFI6_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO45630.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_306_3
unknown

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comp(3025..3276)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_306_4
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3679..4905
DNA (1227bp) protein (409aa)
hypothetical protein Tax=Nafulsella turpanensis RepID=UPI00035D227D
Uncharacterized protein {ECO:0000313|EMBL:GAL83333.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
polysaccharide biosynthesis protein
PLM3_30_b1_sep16_scaffold_306_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4958..5464
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFJ8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98429.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_306_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5503..6816)
DNA (1314bp) protein (438aa)
NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
NADH dehydrogenase (Ubiquinone) Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P1W1_WEEVC
NADH dehydrogenase {ECO:0000313|EMBL:KIC91880.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PLM3_30_b1_sep16_scaffold_306_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6877..8115)
DNA (1239bp) protein (413aa)
3-phosphoglycerate dehydrogenase Tax=Segetibacter koreensis RepID=UPI00036FEB68
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KIC93809.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
D-3-phosphoglycerate dehydrogenase
PLM3_30_b1_sep16_scaffold_306_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8260..9426
DNA (1167bp) protein (389aa)
Beta-lactamase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAL1_NIAKG
Penicillin-binding protein {ECO:0000313|EMBL:GAO45628.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
beta-lactamase
PLM3_30_b1_sep16_scaffold_306_9
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9664..10083)
DNA (420bp) protein (140aa)
Ribosomal protein S23 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
S23 ribosomal protein
Tax=GWA2_Bacteroidetes_31_9_curated
PLM3_30_b1_sep16_scaffold_306_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10251..11741
DNA (1491bp) protein (497aa)
YjeF-related protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAL0_NIAKG
hypothetical protein
YjeF-related protein {ECO:0000313|EMBL:AEV98172.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_306_11
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11949..14270
DNA (2322bp) protein (774aa)
Cadherin domain protein (Fragment) Tax=Rhodopirellula sallentina SM41 RepID=M5UCD6_9PLAN
Cadherin domain protein {ECO:0000313|EMBL:EMI55521.1}; Flags: Fragment;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_306_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14440..15648
DNA (1209bp) protein (403aa)
Rieske [2fe2s] domain containing protein (Fragment) Tax=Acanthamoeba castellanii str. Neff RepID=L8GXN2_ACACA
Uncharacterized protein {ECO:0000313|EMBL:KIC92694.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ring hydroxylating alpha subunit family protein
PLM3_30_b1_sep16_scaffold_306_13
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(15727..16887)
DNA (1161bp) protein (387aa)
Major facilitator superfamily MFS_1 bin=GWC2_Bacteroidetes_40_22 species=Bacillus pseudofirmus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
major facilitator superfamily protein
Tax=GWA2_Bacteroidetes_40_15_curated
PLM3_30_b1_sep16_scaffold_306_14
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16884..17702)
DNA (819bp) protein (273aa)
hypothetical protein Tax=Rudanella lutea RepID=UPI00036592EC
glucosamine/galactosamine-6-phosphate isomerase
Glucosamine/galactosamine-6-phosphate isomerase {ECO:0000313|EMBL:AFK05284.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
PLM3_30_b1_sep16_scaffold_306_15
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17707..18855)
DNA (1149bp) protein (383aa)
Uncharacterized protein Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZZQ3_MAHA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE97900.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
PLM3_30_b1_sep16_scaffold_306_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19091..19600
DNA (510bp) protein (170aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003760B6B
Uncharacterized protein {ECO:0000313|EMBL:GAO41022.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_306_trna_1
unknown

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19900..19973
DNA (74bp)
transferRNA Pro
PLM3_30_b1_sep16_scaffold_306_17
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20505..21587)
DNA (1083bp) protein (361aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037C8641
oxidoreductase
Tax=GWB2_Bacteroidetes_41_8_curated
Displaying 18 items

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