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PLM3_30_b2_sep16_scaffold_1071

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_1071_1
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3..2366
DNA (2364bp) protein (788aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
phosphoketolase Tax=Lamprocystis purpurea RepID=UPI000370273C
phosphoketolase
PLM3_30_b2_sep16_scaffold_1071_2
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2363..2890
DNA (528bp) protein (176aa)
AhpC/TSA family protein Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I1A0_AZOC5
AhpC/TSA family protein
AhpC/TSA family protein {ECO:0000313|EMBL:BAF87348.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
PLM3_30_b2_sep16_scaffold_1071_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2887..3444
DNA (558bp) protein (186aa)
DSBA oxidoreductase Tax=Pedosphaera parvula Ellin514 RepID=B9XF55_9BACT
DSBA oxidoreductase {ECO:0000313|EMBL:EEF61553.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
protein-disulfide isomerase
PLM3_30_b2_sep16_scaffold_1071_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3484..4476
DNA (993bp) protein (331aa)
Rhodanese domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XJ40_9BACT
Rhodanese domain protein {ECO:0000313|EMBL:EEF60078.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_1071_5
unknown

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comp(4395..4907)
DNA (513bp) protein (171aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_1071_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5344..6009
DNA (666bp) protein (222aa)
response regulator receiver protein (EC:1.8.1.9)
Response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Pedosphaera parvula Ellin514 RepID=B9XH42_9BACT
Response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EEF60963.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_1071_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6012..7409
DNA (1398bp) protein (466aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Cyclic nucleotide-binding protein Tax=Pedosphaera parvula Ellin514 RepID=B9XH43_9BACT
histidine kinase
PLM3_30_b2_sep16_scaffold_1071_8
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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8323..8679
DNA (357bp) protein (119aa)
Tax=RBG_16_Planctomycetes_55_9_curated
PLM3_30_b2_sep16_scaffold_1071_9
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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8686..8979
DNA (294bp) protein (98aa)
Putative uncharacterized protein Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SMB2_PLABD
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM3_30_b2_sep16_scaffold_1071_10
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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8994..9347
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Singulisphaera acidiphila RepID=L0DGP7_SINAD
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM3_30_b2_sep16_scaffold_1071_11
unknown

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9365..9454
DNA (90bp) protein (30aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_1071_12
unknown

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comp(9415..9543)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_1071_13
unknown

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9608..11089
DNA (1482bp) protein (494aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_1071_14
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11212..11544
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EII1_GEOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACH39883.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
PLM3_30_b2_sep16_scaffold_1071_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11568..11792)
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XPS4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58197.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_1071_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11794..12597)
DNA (804bp) protein (268aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XPS5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58198.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_1071_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12594..13034)
DNA (441bp) protein (147aa)
Biopolymer transport protein ExbD/TolR Tax=Pedosphaera parvula Ellin514 RepID=B9XPS6_9BACT
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EEF58199.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_1071_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13031..13657)
DNA (627bp) protein (209aa)
MotA/TolQ/ExbB proton channel Tax=Pedosphaera parvula Ellin514 RepID=B9XPS7_9BACT
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:EEF58200.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
MotA/TolQ/ExbB proton channel
PLM3_30_b2_sep16_scaffold_1071_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13962..14558
DNA (597bp) protein (199aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EEF57471.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EEF57471.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XRQ6_9BACT
PLM3_30_b2_sep16_scaffold_1071_20
Human herpesvirus 4, Lymphocryptovirus, Herpesvirales, Viruses

Not on your lists

comp(14699..15070)
DNA (372bp) protein (124aa)
Epstein-Barr nuclear antigen 1 Tax=Epstein-Barr virus (strain GD1) RepID=EBNA1_EBVG
EBNA-1 protein {ECO:0000313|EMBL:AKE13285.1}; species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Lymphocryptovirus.;" source="Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4).;"
collagen triple helix repeat protein
PLM3_30_b2_sep16_scaffold_1071_21
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

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15167..15499
DNA (333bp) protein (111aa)
Thioredoxin Tax=Pedosphaera parvula Ellin514 RepID=B9XBW4_9BACT
thioredoxin
Tax=GWF2_Elusimicrobia_62_30_curated
PLM3_30_b2_sep16_scaffold_1071_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15524..16522
DNA (999bp) protein (333aa)
Type II secretion system protein Tax=Pedosphaera parvula Ellin514 RepID=B9XBW3_9BACT
Type II secretion system protein {ECO:0000313|EMBL:EEF62431.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
type II secretory pathway protein
PLM3_30_b2_sep16_scaffold_1071_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16688..18997)
DNA (2310bp) protein (770aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI00029B4AB5
cytochrome c553
Cytochrome c553 {ECO:0000313|EMBL:AGA29261.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 23 items

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