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PLM3_30_b2_sep16_scaffold_1907

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_1907_1
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(3..491)
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q626_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CAJ73026.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
S-isoprenylcysteine methyltransferase-like protein
PLM3_30_b2_sep16_scaffold_1907_2
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(488..1252)
DNA (765bp) protein (255aa)
Strongly similar to SAM-dependent methyltransferase YecO {ECO:0000313|EMBL:CAJ73027.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAJ73027.1};; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
Strongly similar to SAM-dependent methyltransferase YecO Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q625_9BACT
methyltransferase
PLM3_30_b2_sep16_scaffold_1907_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1680..2126
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D0G7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19829.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_1907_4
unknown

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comp(2280..2591)
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_1907_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3499..3984
DNA (486bp) protein (162aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Aspartate-semialdehyde dehydrogenase Tax=Pedosphaera parvula Ellin514 RepID=B9XNS7_9BACT
aspartate-semialdehyde dehydrogenase
PLM3_30_b2_sep16_scaffold_1907_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4337..4882
DNA (546bp) protein (182aa)
Transcriptional regulator, TraR/DksA family Tax=Pedosphaera parvula Ellin514 RepID=B9XR79_9BACT
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:EEF57692.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
dksA; DnaK suppressor protein
PLM3_30_b2_sep16_scaffold_1907_7
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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4886..5053
DNA (168bp) protein (56aa)
50S ribosomal protein L33 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1WXV0_BACMS
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294, ECO:0000313|EMBL:CBW25907.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
PLM3_30_b2_sep16_scaffold_1907_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5060..5311
DNA (252bp) protein (84aa)
Ribosomal protein S18 Tax=Pedosphaera parvula Ellin514 RepID=B9XR77_9BACT
Ribosomal protein S18 {ECO:0000313|EMBL:EEF57690.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rpsR; ribosomal protein S18
PLM3_30_b2_sep16_scaffold_1907_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5570..6436
DNA (867bp) protein (289aa)
Periplasmic solute binding protein Tax=Pedosphaera parvula Ellin514 RepID=B9XR76_9BACT
Periplasmic solute binding protein {ECO:0000313|EMBL:EEF57689.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
periplasmic solute binding protein
PLM3_30_b2_sep16_scaffold_1907_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6439..7233
DNA (795bp) protein (265aa)
znuC; zinc import ATP-binding protein ZnuC (EC:3.6.3.-)
ABC transporter related-protein Tax=Pedosphaera parvula Ellin514 RepID=B9XR75_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF57688.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_1907_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7223..8056
DNA (834bp) protein (278aa)
ABC-3 protein Tax=Pedosphaera parvula Ellin514 RepID=B9XR74_9BACT
ABC-3 protein {ECO:0000313|EMBL:EEF57687.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ABC transporter
PLM3_30_b2_sep16_scaffold_1907_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8250..8498
DNA (249bp) protein (83aa)
Ferric uptake regulator, Fur family Tax=Pedosphaera parvula Ellin514 RepID=B9XR73_9BACT
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:EEF57686.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Fur family ferric uptake regulator
PLM3_30_b2_sep16_scaffold_1907_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8574..9560
DNA (987bp) protein (329aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Cell wall hydrolase/autolysin Tax=Pedosphaera parvula Ellin514 RepID=B9XII1_9BACT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EEF60442.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_1907_14
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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9764..11266
DNA (1503bp) protein (501aa)
spore coat protein H Tax=Gemmata obscuriglobus RepID=UPI00016C4C85
hypothetical protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM3_30_b2_sep16_scaffold_1907_15
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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11307..12692
DNA (1386bp) protein (462aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000373504E
spore coat protein H
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM3_30_b2_sep16_scaffold_1907_16
unknown

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12812..12985
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_1907_trna_1
unknown

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13774..13845
DNA (72bp)
transferRNA Ala
PLM3_30_b2_sep16_scaffold_1907_trna_2
unknown

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14231..14303
DNA (73bp)
transferRNA Asp
PLM3_30_b2_sep16_scaffold_1907_trna_3
unknown

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14392..14463
DNA (72bp)
transferRNA Pseudo
PLM3_30_b2_sep16_scaffold_1907_trna_4
unknown

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14738..14809
DNA (72bp)
transferRNA Arg
PLM3_30_b2_sep16_scaffold_1907_17
unknown

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15031..15225
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_1907_18
unknown

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15264..15404
DNA (141bp) protein (47aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_1907_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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15401..16210
DNA (810bp) protein (270aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D4H8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18779.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_1907_trna_5
unknown

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16302..16372
DNA (71bp)
transferRNA Ile
PLM3_30_b2_sep16_scaffold_1907_20
unknown

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comp(16669..17181)
DNA (513bp) protein (171aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_1907_trna_6
unknown

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17309..17381
DNA (73bp)
transferRNA Phe
PLM3_30_b2_sep16_scaffold_1907_21
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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17485..18120
DNA (636bp) protein (212aa)
Putative uncharacterized protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DCX6_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF86333.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
Displaying 27 items

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