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PLM3_30_b2_sep16_scaffold_2721

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_2721_1
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..271
DNA (270bp) protein (90aa)
uraH; hydroxyisourate hydrolase (EC:3.5.2.17)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
5-hydroxyisourate hydrolase Tax=Halomonas jeotgali RepID=UPI000345D03B
PLM3_30_b2_sep16_scaffold_2721_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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275..1603
DNA (1329bp) protein (443aa)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:EFH85179.1}; EC=3.5.3.9 {ECO:0000313|EMBL:EFH85179.1};; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Amidase, hydantoinase/carbamoylase family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TYV4_9CHLR
hydantase: amidase, hydantoinase/carbamoylase family
PLM3_30_b2_sep16_scaffold_2721_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1596..2957
DNA (1362bp) protein (454aa)
Allantoinase {ECO:0000256|HAMAP-Rule:MF_01645}; EC=3.5.2.5 {ECO:0000256|HAMAP-Rule:MF_01645};; Allantoin-utilizing enzyme {ECO:0000256|HAMAP-Rule:MF_01645}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
allantoinase (EC:3.5.2.5)
Allantoinase Tax=Pedosphaera parvula Ellin514 RepID=B9XKY8_9BACT
PLM3_30_b2_sep16_scaffold_2721_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2954..3604
DNA (651bp) protein (217aa)
Cupin 2 conserved barrel domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XKY9_9BACT
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EEF59483.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glxB; hypothetical protein
PLM3_30_b2_sep16_scaffold_2721_5
RBG_13_OP11_Beckwithbacteria_35_6_curated, Beckwithbacteria, Microgenomates, Bacteria

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3799..4173
DNA (375bp) protein (125aa)
Multi-sensor hybrid histidine kinase Tax=Methylobacterium sp. GXF4 RepID=I9CPR4_9RHIZ
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Tax=RBG_13_OP11_Beckwithbacteria_35_6_curated
PLM3_30_b2_sep16_scaffold_2721_6

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4297..5976
DNA (1680bp) protein (560aa)
Uncharacterized protein Tax=Flavobacterium sp. CF136 RepID=J2JN01_9FLAO
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48348.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_2721_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6157..6942
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CX22_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21342.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_2721_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7082..7810)
DNA (729bp) protein (243aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ABC transporter related-protein Tax=Pedosphaera parvula Ellin514 RepID=B9XF29_9BACT
ABC transporter
PLM3_30_b2_sep16_scaffold_2721_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7803..9170)
DNA (1368bp) protein (456aa)
hypothetical protein Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI00036576C3
Uncharacterized protein {ECO:0000313|EMBL:EEF61528.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
lolE; ABC transporter permease
PLM3_30_b2_sep16_scaffold_2721_10
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9233..10252
DNA (1020bp) protein (340aa)
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM3_30_b2_sep16_scaffold_2721_11
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

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comp(10467..10805)
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XG26_9BACT
Protein containing Prepilin-type cleavage/methylation {ECO:0000313|EMBL:KJJ83637.1}; species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus Omnitrophus sp. SKK-01.;"
peptidase M48 Ste24p
PLM3_30_b2_sep16_scaffold_2721_12
Leishmania mexicana, Leishmania, Kinetoplastida, Eukaryota

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11473..12363
DNA (891bp) protein (297aa)
Proteophosphoglycan ppg1 Tax=Leishmania mexicana (strain MHOM/GT/2001/U1103) RepID=E9B5T6_LEIMU
Proteophosphoglycan ppg1 {ECO:0000313|EMBL:CBZ30607.1}; species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania.;" source="Leishmania mexicana (strain MHOM/GT/2001/U1103).;"
PLM3_30_b2_sep16_scaffold_2721_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(12678..13922)
DNA (1245bp) protein (415aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI00029A1B77
arylsulfatase A family protein
Arylsulfatase A family protein {ECO:0000313|EMBL:AGA30812.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_30_b2_sep16_scaffold_2721_14
unknown

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comp(14483..15007)
DNA (525bp) protein (175aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_2721_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(15338..16156)
DNA (819bp) protein (273aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI000299E247
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28779.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_30_b2_sep16_scaffold_2721_16
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(16140..17417)
DNA (1278bp) protein (426aa)
Uncharacterized protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R4U4_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB17160.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
PLM3_30_b2_sep16_scaffold_2721_17

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17754..18410
DNA (657bp) protein (219aa)
Marine sediment metagenome DNA, contig: S01H1_L09676 {ECO:0000313|EMBL:GAF90617.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 17 items

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