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PLM3_30_b2_sep16_scaffold_3304

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_3304_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..705
DNA (705bp) protein (235aa)
Sigma54 specific transcriptional regulator, Fis family Tax=Pedosphaera parvula Ellin514 RepID=B9XH12_9BACT
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:EEF60933.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
two component Fis family sigma54-specific transcriptional regulator
PLM3_30_b2_sep16_scaffold_3304_2
unknown

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696..1103
DNA (408bp) protein (136aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_3304_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1119..1988
DNA (870bp) protein (290aa)
squalene synthase (EC:2.5.1.32)
Squalene synthase HpnD Tax=Pedosphaera parvula Ellin514 RepID=B9XH10_9BACT
Squalene synthase HpnD {ECO:0000313|EMBL:EEF60931.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_3304_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1975..2901
DNA (927bp) protein (309aa)
Hopanoid biosynthesis associated protein HpnK Tax=Pedosphaera parvula Ellin514 RepID=B9XH09_9BACT
Hopanoid biosynthesis associated protein HpnK {ECO:0000313|EMBL:EEF60930.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hopanoid biosynthesis associated protein HpnK
PLM3_30_b2_sep16_scaffold_3304_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2937..3377
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XH08_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60929.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_3304_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3459..4109)
DNA (651bp) protein (217aa)
Purine or other phosphorylase family 1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH07_9BACT
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:EEF60928.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hopanoid-associated phosphorylase
PLM3_30_b2_sep16_scaffold_3304_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4199..4918)
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XH06_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60927.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
3'-5' exonuclease, PolB
PLM3_30_b2_sep16_scaffold_3304_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5335..5544
DNA (210bp) protein (70aa)
50S ribosomal protein L35 Tax=Pedosphaera parvula Ellin514 RepID=B9XIW8_9BACT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
50S ribosomal protein L35
PLM3_30_b2_sep16_scaffold_3304_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5553..5777
DNA (225bp) protein (75aa)
50S ribosomal protein L20 Tax=Pedosphaera parvula Ellin514 RepID=B9XIW7_9BACT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rplT; 50S ribosomal protein L20
PLM3_30_b2_sep16_scaffold_3304_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5725..6789)
DNA (1065bp) protein (355aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D2Q2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19492.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM3_30_b2_sep16_scaffold_3304_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6794..7213
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDY2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61873.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_3304_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7867..8223
DNA (357bp) protein (119aa)
Transcriptional regulator, ArsR family Tax=Pedosphaera parvula Ellin514 RepID=B9XFR0_9BACT
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EEF61424.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
transcriptional regulator
PLM3_30_b2_sep16_scaffold_3304_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8228..8668
DNA (441bp) protein (147aa)
Activator of Hsp90 ATPase 1 family protein Tax=Pedosphaera parvula Ellin514 RepID=B9XFR1_9BACT
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:EEF61425.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
activator of Hsp90 ATPase 1 family protein
PLM3_30_b2_sep16_scaffold_3304_14
unknown

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comp(8910..9461)
DNA (552bp) protein (184aa)

This feature has no annotations

Displaying 14 items

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