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PLM3_30_b2_sep16_scaffold_3981

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_3981_1
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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2..481
DNA (480bp) protein (160aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase bin=GWF2_Lentisphaerae_52_8 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
amidohydrolase
Tax=RBG_13_Planctomycetes_62_9_curated
PLM3_30_b2_sep16_scaffold_3981_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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542..826
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XI97_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60358.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_3981_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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843..1184
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XI98_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60359.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_3981_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1410..1982)
DNA (573bp) protein (191aa)
Anti-sigma-factor antagonist Tax=Pedosphaera parvula Ellin514 RepID=B9XNK5_9BACT
Anti-sigma-factor antagonist {ECO:0000313|EMBL:EEF58545.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
anti-sigma factor antagonist
PLM3_30_b2_sep16_scaffold_3981_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2243..2965)
DNA (723bp) protein (241aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III delta Tax=Pedosphaera parvula Ellin514 RepID=B9XNK6_9BACT
DNA polymerase III delta {ECO:0000313|EMBL:EEF58546.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_3981_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3385..3840)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XNK7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58547.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_3981_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4068..4739
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D3M5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18855.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Demethylmenaquinone methyltransferase
PLM3_30_b2_sep16_scaffold_3981_8
unknown

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comp(4791..5564)
DNA (774bp) protein (258aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_3981_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5966..7852
DNA (1887bp) protein (629aa)
Membrane protein insertase YidC Tax=Pedosphaera parvula Ellin514 RepID=B9XJP0_9BACT
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
60 kDa inner membrane insertion protein
PLM3_30_b2_sep16_scaffold_3981_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7888..8337
DNA (450bp) protein (150aa)
Single-stranded nucleic acid binding R3H domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XJP1_9BACT
Single-stranded nucleic acid binding R3H domain protein {ECO:0000313|EMBL:EEF59917.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
R3H domain protein
PLM3_30_b2_sep16_scaffold_3981_11
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8350..9816)
DNA (1467bp) protein (489aa)
RHS Repeat family Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PFL1_CELJU
RHS Repeat family
RHS Repeat family {ECO:0000313|EMBL:ACE83068.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
Displaying 11 items

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