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PLM3_30_b2_sep16_scaffold_131

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_131_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

49..1482
DNA (1434bp) protein (478aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037DEBCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27138.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_30_b2_sep16_scaffold_131_2
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

1568..1822
DNA (255bp) protein (85aa)
Prevent-host-death family protein bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_30_b2_sep16_scaffold_131_3
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

1819..2253
DNA (435bp) protein (145aa)
PilT domain-containing protein Tax=unclassified Opitutaceae RepID=H1IWV3_9BACT
twitching motility protein PilT
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_30_b2_sep16_scaffold_131_4
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2261..2419
DNA (159bp) protein (53aa)
Secreted protein containing DUF1501 Tax=Rhodopirellula europaea SH398 RepID=M5S5Z7_9PLAN
Secreted protein containing DUF1501 {ECO:0000313|EMBL:EMI26866.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_131_5
Pseudoalteromonas haloplanktis, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2960..3487
DNA (528bp) protein (176aa)
Putative mini-circle transposase for insertion sequence Tax=Pseudoalteromonas haloplanktis ANT/505 RepID=F3BQD1_PSEHA
Putative mini-circle transposase for insertion sequence {ECO:0000313|EMBL:EGI71176.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas haloplanktis ANT/505.;"
transposase ISEch11
PLM3_30_b2_sep16_scaffold_131_6
unknown

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comp(3655..4080)
DNA (426bp) protein (142aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_131_7
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4106..5779)
DNA (1674bp) protein (558aa)
Cellulose 1,4-beta-cellobiosidase Tax=Paenibacillus barcinonensis RepID=Q8KKF7_PAEBA
exoglucanase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM3_30_b2_sep16_scaffold_131_8
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5863..7227)
DNA (1365bp) protein (455aa)
RHS repeat-associated core domain protein Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RWK0_SYNP3
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AFY61916.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
PLM3_30_b2_sep16_scaffold_131_9
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(7486..7980)
DNA (495bp) protein (165aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0B1_OPITP
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACB77447.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM3_30_b2_sep16_scaffold_131_10
unknown

Not on your lists

comp(8149..8295)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_131_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8345..11038)
DNA (2694bp) protein (898aa)
Serine/threonine protein kinase Tax=Pedosphaera parvula Ellin514 RepID=B9XAQ6_9BACT
Serine/threonine protein kinase {ECO:0000313|EMBL:EEF63091.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
serine/threonine protein kinase
PLM3_30_b2_sep16_scaffold_131_12

Not on your lists

11417..12226
DNA (810bp) protein (270aa)
Putative integron gene cassette protein Tax=uncultured bacterium RepID=B0BFQ1_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP47609.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
GCN5-related N-acetyltransferase
PLM3_30_b2_sep16_scaffold_131_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13288..16029
DNA (2742bp) protein (914aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Chthoniobacter flavus Ellin428 RepID=B4CYX3_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY20664.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sigma-70 family RNA polymerase sigma factor
PLM3_30_b2_sep16_scaffold_131_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16057..17289
DNA (1233bp) protein (411aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XG07_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61169.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
alpha/beta fold family hydrolase
PLM3_30_b2_sep16_scaffold_131_15
uncultured Oceanospirillales bacterium HF0500_29K23, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17404..19587
DNA (2184bp) protein (728aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002DAA763
Spore coat assembly protein {ECO:0000313|EMBL:ADI22800.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; environmental samples.;" source="uncultured Oceanospirillales bacterium HF0500_29K23.;"
spore coat protein CotH
PLM3_30_b2_sep16_scaffold_131_16
unknown

Not on your lists

comp(19978..20355)
DNA (378bp) protein (126aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_131_17
uncultured gamma proteobacterium HF0770_11A05, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21410..24475)
DNA (3066bp) protein (1022aa)
Putative uncharacterized protein Tax=Gammaproteobacteria RepID=E7C5S8_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:ADI23150.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacterium HF0770_11A05.;"
cellulose-binding family protein
PLM3_30_b2_sep16_scaffold_131_18
unknown

Not on your lists

24668..24811
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_131_19
unknown

Not on your lists

comp(25450..25773)
DNA (324bp) protein (108aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_131_20
unknown

Not on your lists

comp(25822..26229)
DNA (408bp) protein (136aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_131_21
unknown

Not on your lists

comp(26260..26691)
DNA (432bp) protein (144aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_131_22
unknown

Not on your lists

comp(26720..27151)
DNA (432bp) protein (144aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_131_23
unknown

Not on your lists

comp(27179..27610)
DNA (432bp) protein (144aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_131_24
RLO_RIF_OD1_10_39_16, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(27637..29058)
DNA (1422bp) protein (474aa)
Uncharacterized protein Tax=Micavibrio aeruginosavorus EPB RepID=M4VEU2_9PROT
filamentous hemagglutinin family outer membrane protein
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated
PLM3_30_b2_sep16_scaffold_131_25
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(29089..30447)
DNA (1359bp) protein (453aa)
Filamentous hemagglutinin family outer membrane protein Tax=Leptolyngbya sp. PCC 7376 RepID=K9PT11_9CYAN
filamentous hemagglutinin family outer membrane protein
Filamentous hemagglutinin family outer membrane protein {ECO:0000313|EMBL:AFY36555.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7376.;"
PLM3_30_b2_sep16_scaffold_131_26
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(30499..33582)
DNA (3084bp) protein (1028aa)
hypothetical protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM3_30_b2_sep16_scaffold_131_27
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33764..34876)
DNA (1113bp) protein (371aa)
hypothetical protein Tax=Acidovorax avenae RepID=UPI0002D41816
endoglucanase
Autotransporter-associated beta strand repeat protein {ECO:0000313|EMBL:AFL74052.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
PLM3_30_b2_sep16_scaffold_131_28

Not on your lists

comp(35097..35702)
DNA (606bp) protein (202aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0B1_OPITP
Marine sediment metagenome DNA, contig: S06H3_L01139 {ECO:0000313|EMBL:GAI17581.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ECF subfamily RNA polymerase sigma-24 factor
PLM3_30_b2_sep16_scaffold_131_29
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(35956..36537)
DNA (582bp) protein (194aa)
Serine/threonine protein kinase Tax=Singulisphaera acidiphila RepID=L0DHF5_SINAD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AGA28248.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 29 items

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