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PLM3_30_b2_sep16_scaffold_216

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_216_1
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..1237)
DNA (1236bp) protein (412aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037CEAE6
amidohydrolase
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM3_30_b2_sep16_scaffold_216_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1407..2549
DNA (1143bp) protein (381aa)
NHL repeat containing protein Tax=Pedosphaera parvula Ellin514 RepID=B9XQ00_9BACT
NHL repeat containing protein {ECO:0000313|EMBL:EEF58097.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NHL repeat-containing protein
PLM3_30_b2_sep16_scaffold_216_3
Anabaena sp. 90, Anabaena, Nostocales, Cyanobacteria, Bacteria

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comp(2735..3361)
DNA (627bp) protein (209aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003488321
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFW94680.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena sp. 90.;"
PLM3_30_b2_sep16_scaffold_216_4
unknown

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3364..3882
DNA (519bp) protein (173aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_216_5
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

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3927..6671
DNA (2745bp) protein (915aa)
DEAD/DEAH box helicase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XLH7_9BACT
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AKC84134.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
PLM3_30_b2_sep16_scaffold_216_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6767..7630
DNA (864bp) protein (288aa)
S-methyl-5'-thioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.28 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
mtaP; 5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
S-methyl-5'-thioadenosine phosphorylase Tax=Pedosphaera parvula Ellin514 RepID=B9XBQ8_9BACT
PLM3_30_b2_sep16_scaffold_216_7
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7648..14895)
DNA (7248bp) protein (2416aa)
Uncharacterized protein Tax=Flavobacterium cauense R2A-7 RepID=V6RWN6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:AJR04928.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga.;" source="Siansivirga zeaxanthinifaciens CC-SAMT-1.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_216_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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15107..15493
DNA (387bp) protein (129aa)
Endoribonuclease L-PSP Tax=Pedosphaera parvula Ellin514 RepID=B9XMP5_9BACT
Endoribonuclease L-PSP {ECO:0000313|EMBL:EEF58944.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
endoribonuclease L-PSP
PLM3_30_b2_sep16_scaffold_216_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15607..16983
DNA (1377bp) protein (459aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XMP6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58945.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
RmuC-domain-containing protein
PLM3_30_b2_sep16_scaffold_216_10
unknown

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comp(17014..17268)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_216_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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17407..18207
DNA (801bp) protein (267aa)
beta-lactamase Tax=Verrucomicrobium spinosum RepID=UPI0001746955
penicillin-binding protein, beta-lactamase class C
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 11 items

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