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PLM3_30_b2_sep16_scaffold_292

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_292_1
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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1..1500
DNA (1500bp) protein (500aa)
Outer membrane adhesin like proteiin Tax=Mycobacterium tusciae JS617 RepID=H1K1B0_9MYCO
VCBS repeat-containing protein
Tax=RBG_13_Chloroflexi_57_8_curated
PLM3_30_b2_sep16_scaffold_292_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1513..2562
DNA (1050bp) protein (350aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XM03_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59131.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_292_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2797..4632
DNA (1836bp) protein (612aa)
GTP-binding protein TypA Tax=Pedosphaera parvula Ellin514 RepID=B9XP09_9BACT
GTP-binding protein TypA {ECO:0000313|EMBL:EEF58475.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
GTP-binding protein
PLM3_30_b2_sep16_scaffold_292_4
unknown

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comp(4656..4883)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_292_5
unknown

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comp(4909..5979)
DNA (1071bp) protein (357aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_292_6
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(6205..8181)
DNA (1977bp) protein (659aa)
Uncharacterized protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R6V1_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB17401.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
PLM3_30_b2_sep16_scaffold_292_trna_1
unknown

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8413..8484
DNA (72bp)
transferRNA Glu
PLM3_30_b2_sep16_scaffold_292_7
unknown

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comp(8431..8538)
DNA (108bp) protein (36aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_292_8
unknown

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comp(8535..9455)
DNA (921bp) protein (307aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_292_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9561..9995)
DNA (435bp) protein (145aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000374970F
NADH-quinone oxidoreductase
PLM3_30_b2_sep16_scaffold_292_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10211..11314
DNA (1104bp) protein (368aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Pedosphaera parvula Ellin514 RepID=B9XEU5_9BACT
peptidylprolyl isomerase
PLM3_30_b2_sep16_scaffold_292_11
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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12097..13500
DNA (1404bp) protein (468aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6C2L7_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL60876.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_292_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13945..17754
DNA (3810bp) protein (1270aa)
LamG domain protein jellyroll fold domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DBW7_9BACT
LamG domain protein jellyroll fold domain protein {ECO:0000313|EMBL:EDY16083.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM3_30_b2_sep16_scaffold_292_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17847..18875
DNA (1029bp) protein (343aa)
Oxidoreductase molybdopterin binding Tax=Pedosphaera parvula Ellin514 RepID=B9XIV1_9BACT
Oxidoreductase molybdopterin binding {ECO:0000313|EMBL:EEF60178.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
sulfite oxidase subunit YedY
PLM3_30_b2_sep16_scaffold_292_14
unknown

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19004..19252
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_292_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19488..20285)
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUQ6_OPITP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_30_b2_sep16_scaffold_292_16
unknown

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20455..20571
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 17 items

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