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PLM3_30_b2_sep16_scaffold_371

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_371_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..237
DNA (237bp) protein (79aa)
Oligoendopeptidase, M3 family Tax=Pedosphaera parvula Ellin514 RepID=B9XIA2_9BACT
Oligoendopeptidase, M3 family {ECO:0000313|EMBL:EEF60363.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oligoendopeptidase
PLM3_30_b2_sep16_scaffold_371_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

794..1900
DNA (1107bp) protein (369aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CWD5_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM3_30_b2_sep16_scaffold_371_3
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

2103..2855
DNA (753bp) protein (251aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XMJ1_9BACT
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM3_30_b2_sep16_scaffold_371_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2930..5677
DNA (2748bp) protein (916aa)
Serine/threonine protein kinase with TPR repeats Tax=Pedosphaera parvula Ellin514 RepID=B9XJ28_9BACT
Serine/threonine protein kinase with TPR repeats {ECO:0000313|EMBL:EEF60066.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
TPR repeat-containing serine/threonine protein kinase
PLM3_30_b2_sep16_scaffold_371_5
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

5689..6471
DNA (783bp) protein (261aa)
Immunoglobulin I-set domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XJN0_9BACT
Tax=CG_Elusi_03
PLM3_30_b2_sep16_scaffold_371_6
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7737..8438
DNA (702bp) protein (234aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000373748B
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AFY61916.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
PLM3_30_b2_sep16_scaffold_371_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8500..9423)
DNA (924bp) protein (308aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase Tax=Pedosphaera parvula Ellin514 RepID=B9XQY3_9BACT
PLM3_30_b2_sep16_scaffold_371_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9593..10909)
DNA (1317bp) protein (439aa)
Oxidoreductase domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R0_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EDY17118.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
oxidoreductase
PLM3_30_b2_sep16_scaffold_371_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11740..12219)
DNA (480bp) protein (160aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
xylA; xylose isomerase (EC:5.3.1.5)
Xylose isomerase Tax=Pedosphaera parvula Ellin514 RepID=B9XEL1_9BACT
PLM3_30_b2_sep16_scaffold_371_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12300..13088)
DNA (789bp) protein (263aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
xylose isomerase (EC:5.3.1.5)
Xylose isomerase Tax=Pedosphaera parvula Ellin514 RepID=B9XEL1_9BACT
PLM3_30_b2_sep16_scaffold_371_11
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13695..14714)
DNA (1020bp) protein (340aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C34E3
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:ADV64128.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
PLM3_30_b2_sep16_scaffold_371_12
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14943..15722)
DNA (780bp) protein (260aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000376D889
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:ADV64127.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
PLM3_30_b2_sep16_scaffold_371_13
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15859..16758)
DNA (900bp) protein (300aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C44B5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV64126.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
PLM3_30_b2_sep16_scaffold_371_14
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

comp(16755..17609)
DNA (855bp) protein (285aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C44B6
Uncharacterized protein {ECO:0000313|EMBL:EDM25337.1}; species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_371_15
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(17814..18287)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TA29_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMR73748.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_371_16
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18462..19214
DNA (753bp) protein (251aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XB13_9BACT
family 2 glycosyl transferase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
PLM3_30_b2_sep16_scaffold_371_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

19211..21313
DNA (2103bp) protein (701aa)
TPR repeat-containing protein Tax=Pedosphaera parvula Ellin514 RepID=B9XBT7_9BACT
TPR repeat-containing protein {ECO:0000313|EMBL:EEF62405.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
TPR repeat-containing protein
PLM3_30_b2_sep16_scaffold_371_18
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(21406..22371)
DNA (966bp) protein (322aa)
methyltransferase
SAM-dependent methyltransferase bin=GWC2_Deltaproteobacteria_55_46 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_30_b2_sep16_scaffold_371_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

22480..23535
DNA (1056bp) protein (352aa)
KpsF/GutQ family protein {ECO:0000313|EMBL:EEF57542.1}; EC=5.3.1.13 {ECO:0000313|EMBL:EEF57542.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
KpsF/GutQ family protein (EC:5.3.1.13)
KpsF/GutQ family protein Tax=Pedosphaera parvula Ellin514 RepID=B9XRH1_9BACT
PLM3_30_b2_sep16_scaffold_371_20
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23632..25743
DNA (2112bp) protein (704aa)
Uncharacterized protein (Fragment) Tax=Gillisia limnaea DSM 15749 RepID=H2BT46_9FLAO
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM3_30_b2_sep16_scaffold_371_21
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(25752..26858)
DNA (1107bp) protein (369aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003781FB9
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:KJU83810.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
PLM3_30_b2_sep16_scaffold_371_22
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27236..28015
DNA (780bp) protein (260aa)
hypothetical protein Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI00035DAB67
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF22924.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 12-X).;"
PLM3_30_b2_sep16_scaffold_371_23
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(28032..28913)
DNA (882bp) protein (294aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI0001744766
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Displaying 23 items

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