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PLM3_30_b2_sep16_scaffold_381

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_381_1
unknown

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comp(3..209)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_381_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(271..3657)
DNA (3387bp) protein (1129aa)
Heme-binding protein Tax=Pedosphaera parvula Ellin514 RepID=B9XE96_9BACT
Heme-binding protein {ECO:0000313|EMBL:EEF61987.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
heme-binding protein
PLM3_30_b2_sep16_scaffold_381_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3811..4563)
DNA (753bp) protein (251aa)
Integral membrane protein TerC Tax=Pedosphaera parvula Ellin514 RepID=B9XRJ0_9BACT
Integral membrane protein TerC {ECO:0000313|EMBL:EEF57561.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
integral membrane protein TerC
PLM3_30_b2_sep16_scaffold_381_4
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4869..5693)
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I192_CALAS
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
PLM3_30_b2_sep16_scaffold_381_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5746..6747
DNA (1002bp) protein (334aa)
Cytochrome c assembly protein Tax=Pedosphaera parvula Ellin514 RepID=B9XN61_9BACT
Cytochrome c assembly protein {ECO:0000313|EMBL:EEF58723.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ResC/HemX-like cytochrome c biogenesis membrane protein
PLM3_30_b2_sep16_scaffold_381_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6807..7865
DNA (1059bp) protein (353aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Glutamyl-tRNA reductase Tax=Pedosphaera parvula Ellin514 RepID=B9XN62_9BACT
glutamyl-tRNA reductase
PLM3_30_b2_sep16_scaffold_381_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7869..8891
DNA (1023bp) protein (341aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase Tax=Pedosphaera parvula Ellin514 RepID=B9XN63_9BACT
PLM3_30_b2_sep16_scaffold_381_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

8938..10479
DNA (1542bp) protein (514aa)
Uroporphyrin-III C-methyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XN64_9BACT
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EEF58726.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
uroporphyrin-III C-methyltransferase
PLM3_30_b2_sep16_scaffold_381_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10589..12808
DNA (2220bp) protein (740aa)
Multi-sensor signal transduction histidine kinase Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VR37_9CYAN
PAS domain S-box {ECO:0000313|EMBL:KCZ71709.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
multi-sensor signal transduction histidine kinase
PLM3_30_b2_sep16_scaffold_381_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(12875..13609)
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DBK3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16190.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_381_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13827..14807
DNA (981bp) protein (327aa)
Alpha-glucan phosphorylase {ECO:0000313|EMBL:EEF57047.1}; EC=2.4.1.1 {ECO:0000313|EMBL:EEF57047.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Alpha-glucan phosphorylase Tax=Pedosphaera parvula Ellin514 RepID=B9XSY6_9BACT
alpha-glucan phosphorylase
PLM3_30_b2_sep16_scaffold_381_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14777..15985
DNA (1209bp) protein (403aa)
Alpha-glucan phosphorylase {ECO:0000313|EMBL:EEF57047.1}; EC=2.4.1.1 {ECO:0000313|EMBL:EEF57047.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-glucan phosphorylase Tax=Pedosphaera parvula Ellin514 RepID=B9XSY6_9BACT
PLM3_30_b2_sep16_scaffold_381_13
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15986..16336)
DNA (351bp) protein (117aa)
hypothetical protein Tax=Hahella ganghwensis RepID=UPI000373D36F
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
PLM3_30_b2_sep16_scaffold_381_14
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16915..18657
DNA (1743bp) protein (581aa)
Outer membrane autotransporter barrel domain protein bin=GWF2_Lentisphaerae_57_35 species=Stenotrophomonas maltophilia genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM3_30_b2_sep16_scaffold_381_15
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18900..19457
DNA (558bp) protein (186aa)
Alpha-ribazole-5'-phosphate phosphatase Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CD90_MYXFH
alpha-ribazole-5'-phosphate phosphatase
Alpha-ribazole-5'-phosphate phosphatase {ECO:0000313|EMBL:AEI66007.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
PLM3_30_b2_sep16_scaffold_381_16
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(19533..20564)
DNA (1032bp) protein (344aa)
Putative uncharacterized protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VIP8_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX78255.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
aminoglycoside phosphotransferase
PLM3_30_b2_sep16_scaffold_381_17
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20561..21769)
DNA (1209bp) protein (403aa)
Group 1 glycosyl transferase Tax=Methylobacterium sp. GXF4 RepID=I9WU97_9RHIZ
glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_30_b2_sep16_scaffold_381_18
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21766..23031)
DNA (1266bp) protein (422aa)
Glycosyl transferase group 1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNE1_9GAMM
PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family {ECO:0000313|EMBL:KFZ89190.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
group 1 glycosyl transferase
PLM3_30_b2_sep16_scaffold_381_19
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23035..24735)
DNA (1701bp) protein (567aa)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AFZ30748.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AFZ30748.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI000382ED15
ABC-type multidrug transport system ATPase and permease component
PLM3_30_b2_sep16_scaffold_381_20
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24738..25301)
DNA (564bp) protein (188aa)
Putative glycosyltransferase Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LP51_DINSH
putative glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EFV94793.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
Displaying 20 items

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