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PLM3_30_b2_sep16_scaffold_399

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_399_1

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3..1076
DNA (1074bp) protein (358aa)
Molybdopterin biosynthesis protein MoeB Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFN3_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KKM72126.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
molybdopterin biosynthesis protein MoeB
PLM3_30_b2_sep16_scaffold_399_2
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1069..2139
DNA (1071bp) protein (357aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UCQ5_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC46686.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM3_30_b2_sep16_scaffold_399_3
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2143..3546
DNA (1404bp) protein (468aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UGI6_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC46687.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM3_30_b2_sep16_scaffold_399_4

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3859..4608
DNA (750bp) protein (250aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UF71_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KKL84486.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_399_5
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

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4775..5239
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFN7_MYXSD
hypothetical protein
Tax=RBG_13_Planctomycetes_46_10_curated
PLM3_30_b2_sep16_scaffold_399_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5277..6068
DNA (792bp) protein (264aa)
Protein-export membrane protein SecD Tax=Pedosphaera parvula Ellin514 RepID=B9XN52_9BACT
Protein-export membrane protein SecD {ECO:0000313|EMBL:EEF58714.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
secD; preprotein translocase subunit SecD
PLM3_30_b2_sep16_scaffold_399_7
unknown

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6732..6938
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_399_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6935..8053
DNA (1119bp) protein (373aa)
bioF; 8-amino-7-oxononanoate synthase (EC:2.3.1.47)
Aminotransferase class I and II Tax=Pedosphaera parvula Ellin514 RepID=B9XGK2_9BACT
Aminotransferase class I and II {ECO:0000313|EMBL:EEF61053.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_399_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(8202..9560)
DNA (1359bp) protein (453aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XF96_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61594.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_399_10
unknown

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comp(9557..10135)
DNA (579bp) protein (193aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_399_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(10098..10571)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XF98_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61596.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_399_12
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(11346..11921)
DNA (576bp) protein (192aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit bin=GWB1_Deltaproteobacteria_rel_55_8 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha
Tax=GWB1_Bdellovibrionales_55_8_curated
PLM3_30_b2_sep16_scaffold_399_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(12297..13667)
DNA (1371bp) protein (457aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
tRNA modification GTPase MnmE Tax=Pedosphaera parvula Ellin514 RepID=B9XIZ6_9BACT
tRNA modification GTPase TrmE
PLM3_30_b2_sep16_scaffold_399_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(13753..13968)
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XIZ5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60222.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_399_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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14151..14480
DNA (330bp) protein (110aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|SAAS:SAAS00085795}; EC=4.2.1.126 {ECO:0000256|SAAS:SAAS00085795};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Glucokinase regulatory-like protein Tax=Pedosphaera parvula Ellin514 RepID=B9XIZ4_9BACT
Displaying 15 items

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