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PLM3_30_b2_sep16_scaffold_502

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_502_1
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

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3..2852
DNA (2850bp) protein (950aa)
Spore coat protein CotH Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EK06_CORAD
spore coat protein CotH
Spore coat protein CotH {ECO:0000313|EMBL:ADE54755.1}; species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
PLM3_30_b2_sep16_scaffold_502_2

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3306..5105
DNA (1800bp) protein (600aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035E07A0
Uncharacterized protein {ECO:0000313|EMBL:KKM02112.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
spore coat protein CotH
PLM3_30_b2_sep16_scaffold_502_3
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5146..10707
DNA (5562bp) protein (1854aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI000373F83E
spore coat protein CotH
Tax=RBG_13_Planctomycetes_63_9_curated
PLM3_30_b2_sep16_scaffold_502_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10938..11600
DNA (663bp) protein (221aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Imidazoleglycerol-phosphate dehydratase Tax=Pedosphaera parvula Ellin514 RepID=B9XG22_9BACT
imidazoleglycerol-phosphate dehydratase
PLM3_30_b2_sep16_scaffold_502_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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11639..12241
DNA (603bp) protein (201aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XG21_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF61183.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ECF subfamily RNA polymerase sigma-24 subunit
PLM3_30_b2_sep16_scaffold_502_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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12250..12792
DNA (543bp) protein (181aa)
Putative transmembrane anti-sigma factor Tax=Pedosphaera parvula Ellin514 RepID=B9XG20_9BACT
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EEF61182.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_502_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12789..13253
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XG19_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61181.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_502_8
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(13348..13776)
DNA (429bp) protein (143aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI00030902B7
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EKE99582.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
acetyltransferase (GNAT) family protein
PLM3_30_b2_sep16_scaffold_502_9
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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comp(13790..17398)
DNA (3609bp) protein (1203aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036781DA
ASPIC/UnbV domain protein
Tax=RBG_13_Caldithrix_44_9_curated
PLM3_30_b2_sep16_scaffold_502_10
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17508..21989)
DNA (4482bp) protein (1494aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037F4718
Uncharacterized protein {ECO:0000313|EMBL:EIC29886.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_502_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(21986..24757)
DNA (2772bp) protein (924aa)
Ig domain protein group 2 domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XB04_9BACT
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:EEF63189.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_502_12
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25070..26308)
DNA (1239bp) protein (413aa)
ASPIC/UnbV domain-containing protein Tax=Rhodopirellula maiorica SM1 RepID=M5RPP2_9PLAN
ASPIC/UnbV domain-containing protein {ECO:0000313|EMBL:EMI21191.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_502_13
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(26305..26847)
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6C702_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL59473.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_502_14
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(26880..27308)
DNA (429bp) protein (143aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM3_30_b2_sep16_scaffold_502_15
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(27312..27635)
DNA (324bp) protein (108aa)
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM3_30_b2_sep16_scaffold_502_16
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(27684..30551)
DNA (2868bp) protein (956aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036C19EB
Putative membrane protein {ECO:0000313|EMBL:EMI21190.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
response regulator aspartate phosphatase rapC
PLM3_30_b2_sep16_scaffold_502_17
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

30857..32263
DNA (1407bp) protein (469aa)
hypothetical protein bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_30_b2_sep16_scaffold_502_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

32284..32826
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XJY4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59807.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_502_19
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(33136..33627)
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P1S0_GRAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU35895.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
PLM3_30_b2_sep16_scaffold_502_20
unknown

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comp(33645..34169)
DNA (525bp) protein (175aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_502_21
unknown

Not on your lists

comp(34262..34780)
DNA (519bp) protein (173aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI00029A63FD
PLM3_30_b2_sep16_scaffold_502_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(34785..36572)
DNA (1788bp) protein (596aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003784AF0
lysyl-tRNA synthetase
PLM3_30_b2_sep16_scaffold_502_23

Not on your lists

37021..40551
DNA (3531bp) protein (1177aa)
Secreted protein containing DUF1549 Tax=Rhodopirellula maiorica SM1 RepID=M5RN33_9PLAN
Planctomycete cytochrome C domain secreted protein {ECO:0000313|EMBL:AGW45562.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium Lac161.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_502_24

Not on your lists

40562..40753
DNA (192bp) protein (64aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003711602
Uncharacterized protein {ECO:0000313|EMBL:AGW45563.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium Lac161.;"
sulfatase
Displaying 24 items

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