ggKbase home page

PLM3_30_b2_sep16_scaffold_568

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_568_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

90..1058
DNA (969bp) protein (323aa)
UDP-glucose 4-epimerase Tax=Pedosphaera parvula Ellin514 RepID=B9XPR8_9BACT
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EEF58191.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
galE; UDP-glucose 4-epimerase
PLM3_30_b2_sep16_scaffold_568_2
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

1195..1647
DNA (453bp) protein (151aa)
Transposase bin=GWF2_Bacteroidetes_38_335 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
transposase
Tax=CG_Arma_02
PLM3_30_b2_sep16_scaffold_568_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1829..7123)
DNA (5295bp) protein (1765aa)
Putative membrane-bound dehydrogenase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA74_SINAD
membrane-bound dehydrogenase
Putative membrane-bound dehydrogenase {ECO:0000313|EMBL:AGA25760.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_30_b2_sep16_scaffold_568_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7372..8001)
DNA (630bp) protein (210aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Putative 3-methyladenine DNA glycosylase Tax=Pedosphaera parvula Ellin514 RepID=B9XFY9_9BACT
3-methyladenine DNA glycosylase
PLM3_30_b2_sep16_scaffold_568_5
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8360..9100)
DNA (741bp) protein (247aa)
Conserved domain protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DEN2_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERK88176.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
PLM3_30_b2_sep16_scaffold_568_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(9107..9688)
DNA (582bp) protein (194aa)
Membrane-flanked domain Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTG8_OPITP
membrane-flanked domain-containing protein
Membrane-flanked domain {ECO:0000313|EMBL:ACB73913.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM3_30_b2_sep16_scaffold_568_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9695..11200)
DNA (1506bp) protein (502aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000378745D
NADH dehydrogenase I subunit N
PLM3_30_b2_sep16_scaffold_568_8
unknown

Not on your lists

11468..11926
DNA (459bp) protein (153aa)

This feature has no annotations

Displaying 8 items

View Taxonomy