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PLM3_30_b2_sep16_scaffold_754

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_754_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1..177)
DNA (177bp) protein (59aa)
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS Tax=Pedosphaera parvula Ellin514 RepID=B9XLS8_9BACT
Cysteine desulfurase NifS {ECO:0000313|EMBL:EEF59185.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_754_2
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

514..2199
DNA (1686bp) protein (562aa)
Nitrite and sulphite reductase 4Fe-4S region Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSB5_OPITP
nitrite and sulfite reductase 4Fe-4S region
Nitrite and sulphite reductase 4Fe-4S region {ECO:0000313|EMBL:ACB75714.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM3_30_b2_sep16_scaffold_754_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2253..2918
DNA (666bp) protein (222aa)
Phosphoadenylyl-sulfate reductase (Thioredoxin) {ECO:0000313|EMBL:EDY17846.1}; EC=1.8.4.8 {ECO:0000313|EMBL:EDY17846.1};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphoadenylyl-sulfate reductase (thioredoxin) (EC:1.8.4.8)
Phosphoadenylyl-sulfate reductase (Thioredoxin) Tax=Chthoniobacter flavus Ellin428 RepID=B4D6P5_9BACT
PLM3_30_b2_sep16_scaffold_754_4
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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2955..3329
DNA (375bp) protein (125aa)
Uncharacterized protein bin=GWF2_Bacteroidetes_35_48 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
GTP-binding signal recognition particle
Tax=GWF2_Bacteroidetes_35_48_curated
PLM3_30_b2_sep16_scaffold_754_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

3390..4292
DNA (903bp) protein (301aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Sulfate adenylyltransferase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSB3_OPITP
PLM3_30_b2_sep16_scaffold_754_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4334..4546
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D8I2_9BACT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_30_b2_sep16_scaffold_754_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4543..4947
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D8I1_9BACT
PilT protein domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_30_b2_sep16_scaffold_754_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4957..6273
DNA (1317bp) protein (439aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sulfate adenylyltransferase, large subunit (EC:2.7.7.4)
Sulfate adenylyltransferase, large subunit Tax=Chthoniobacter flavus Ellin428 RepID=B4D6P7_9BACT
PLM3_30_b2_sep16_scaffold_754_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7030..8313)
DNA (1284bp) protein (428aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
xseA; Exodeoxyribonuclease 7 large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XJ00_9BACT
PLM3_30_b2_sep16_scaffold_754_10
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(8428..8829)
DNA (402bp) protein (134aa)
HEAT repeat-containing protein Tax=Rivularia sp. PCC 7116 RepID=K9R5N5_9CYAN
HEAT repeat-containing protein
HEAT repeat-containing protein {ECO:0000313|EMBL:AFY52766.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
PLM3_30_b2_sep16_scaffold_754_11
unknown

Not on your lists

8854..9453
DNA (600bp) protein (200aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_754_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9850..10746)
DNA (897bp) protein (299aa)
Metallophosphoesterase Tax=Pedosphaera parvula Ellin514 RepID=B9XIZ9_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:EEF60226.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Calcineurin-like phosphoesterase
PLM3_30_b2_sep16_scaffold_754_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10779..11588)
DNA (810bp) protein (270aa)
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000313|EMBL:EEF61046.1}; EC=5.3.1.16 {ECO:0000313|EMBL:EEF61046.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Tax=Pedosphaera parvula Ellin514 RepID=B9XGJ5_9BACT
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
PLM3_30_b2_sep16_scaffold_754_14
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11844..19478
DNA (7635bp) protein (2545aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000377B051
autotransporter-associated beta strand repeat-containing protein
Tax=RBG_16_Planctomycetes_64_10_curated
PLM3_30_b2_sep16_scaffold_754_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

19728..20624
DNA (897bp) protein (299aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Ornithine carbamoyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XQ49_9BACT
ornithine carbamoyltransferase
PLM3_30_b2_sep16_scaffold_754_16
R_SM2F11_46_11, SM2F11, Bacteria

Not on your lists

20685..21389
DNA (705bp) protein (235aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA300-O17 RepID=UPI0003825731
peptidase M50
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_46_11_curated
PLM3_30_b2_sep16_scaffold_754_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

21522..22418
DNA (897bp) protein (299aa)
Phage SPO1 DNA polymerase-related protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDL4_9BACT
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:EEF62160.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Uracil-DNA glycosylase
PLM3_30_b2_sep16_scaffold_754_18
unknown

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22478..22549
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 18 items

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