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PLM3_30_b2_sep16_scaffold_932

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_932_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2..400
DNA (399bp) protein (133aa)
DNA mismatch repair protein MutS Tax=Pedosphaera parvula Ellin514 RepID=B9XNR3_9BACT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA mismatch repair protein MutS
PLM3_30_b2_sep16_scaffold_932_2
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

524..1792
DNA (1269bp) protein (423aa)
putative acyltransferase (EC:2.3.1.-)
Probable transferase transmembrane protein Tax=Planctomyces maris DSM 8797 RepID=A6C6S7_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KIF82720.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
PLM3_30_b2_sep16_scaffold_932_3
unknown

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1873..1974
DNA (102bp) protein (34aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_932_4
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

2183..2626
DNA (444bp) protein (148aa)
Ribosomal RNA adenine dimethylase domain-containing protein bin=GWF2_Lentisphaerae_52_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_30_b2_sep16_scaffold_932_5
RHI_WWE3_38_15, WWE3, Bacteria

Not on your lists

comp(2710..3090)
DNA (381bp) protein (127aa)
Tax=RIFCSPHIGHO2_12_FULL_WWE3_38_15_curated
PLM3_30_b2_sep16_scaffold_932_6
RHI_OD1_Kaiserbacteria_53_13, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

3392..4039
DNA (648bp) protein (216aa)
GDSL-like Lipase/Acylhydrolase family protein bin=GWD2_Deltaproteobacteria_55_8 species=Xenococcus sp. PCC 7305 genus=Xenococcus taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lipolytic protein family
Tax=RIFCSPHIGHO2_12_FULL_OD1_Kaiserbacteria_53_13_curated
PLM3_30_b2_sep16_scaffold_932_7
unknown

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comp(3912..4736)
DNA (825bp) protein (275aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_932_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5105..5587
DNA (483bp) protein (161aa)
UbiD family decarboxylase Tax=Pedosphaera parvula Ellin514 RepID=B9XCT0_9BACT
UbiD family decarboxylase {ECO:0000313|EMBL:EEF62276.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ubiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase
PLM3_30_b2_sep16_scaffold_932_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5589..6707)
DNA (1119bp) protein (373aa)
Fructose-1,6-bisphosphatase Tax=Chthoniobacter flavus Ellin428 RepID=B4D2D0_9BACT
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glpX; fructose 1,6-bisphosphatase II
PLM3_30_b2_sep16_scaffold_932_10
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

6874..7665
DNA (792bp) protein (264aa)
protein of unknown function
Tax=RBG_16_Planctomycetes_59_8_curated
PLM3_30_b2_sep16_scaffold_932_11
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7997..8617
DNA (621bp) protein (207aa)
Short-chain dehydrogenase/reductase SDR Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZY48_DESOH
short-chain dehydrogenase/reductase SDR
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
PLM3_30_b2_sep16_scaffold_932_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8850..10487
DNA (1638bp) protein (546aa)
FAD linked oxidase domain-containing protein Tax=Rhodanobacter denitrificans RepID=I4WS66_9GAMM
FAD/FMN-dependent dehydrogenase
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:AGG89397.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
PLM3_30_b2_sep16_scaffold_932_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10484..10705
DNA (222bp) protein (74aa)
UbiD family decarboxylase Tax=Pedosphaera parvula Ellin514 RepID=B9XCT0_9BACT
UbiD family decarboxylase {ECO:0000313|EMBL:EEF62276.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM3_30_b2_sep16_scaffold_932_14
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10728..10976
DNA (249bp) protein (83aa)
Uncharacterized protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM3_30_b2_sep16_scaffold_932_15
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

10973..11410
DNA (438bp) protein (146aa)
Ribonuclease VapC bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_13_Aminicenantes_62_12_curated
PLM3_30_b2_sep16_scaffold_932_16
GWC2_OP11_41_21, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

11676..13163
DNA (1488bp) protein (496aa)
Uncharacterized protein Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ0_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:KKS01797.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWC2_41_21.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_932_17
unknown

Not on your lists

13521..13778
DNA (258bp) protein (86aa)
hypothetical protein
PLM3_30_b2_sep16_scaffold_932_18
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

13762..14199
DNA (438bp) protein (146aa)
Putative nucleic acid-binding protein, contains PIN domain bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
PilT protein domain-containing protein
Tax=BJP_IG2102_Bacteroidetes_40_9
PLM3_30_b2_sep16_scaffold_932_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(14330..14800)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FA91_SACEN bin=16ft_combo_ws3_JS1 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycosyl hydrolase BNR repeat-containing glycosyl hydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 19 items

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