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PLM3_30_b2_sep16_scaffold_359

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_359_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2..673)
DNA (672bp) protein (224aa)
Glycosyl transferase family 2 Tax=Pedosphaera parvula Ellin514 RepID=B9XKS9_9BACT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EEF59572.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
family 2 glycosyl transferase
PLM3_30_b2_sep16_scaffold_359_2
unknown

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comp(864..1034)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_359_3
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1149..1640)
DNA (492bp) protein (164aa)
hypothetical protein Tax=Saccharomonospora saliphila RepID=UPI00036DF948
Uncharacterized protein {ECO:0000313|EMBL:KFL35741.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_359_4
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2861..3643)
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4RFK8_9ACTO
Methyltransferase {ECO:0000313|EMBL:BAQ67315.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidophilum (Rhodobacter sulfidophilus).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_359_5

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3856..4548
DNA (693bp) protein (231aa)
Two component transcriptional regulator, winged helix family Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49480.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
phoB; winged-helix phosphate transcriptional response regulator
PLM3_30_b2_sep16_scaffold_359_6

Not on your lists

4555..5832
DNA (1278bp) protein (426aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PAS/PAC sensor signal transduction histidine kinase Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U6_9BACT
multi-sensor signal transduction histidine kinase
PLM3_30_b2_sep16_scaffold_359_7
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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5968..6987
DNA (1020bp) protein (340aa)
Phosphate-binding protein PstS Tax=Geobacter sp. (strain M18) RepID=E8WPK2_GEOS8
phosphate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_30_b2_sep16_scaffold_359_8
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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7043..8026
DNA (984bp) protein (328aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI000362FF75
phosphate ABC transporter, inner membrane subunit PstC
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_30_b2_sep16_scaffold_359_9
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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8032..8892
DNA (861bp) protein (287aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI0003642359
pstA; phosphate ABC transporter membrane protein PstA
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_30_b2_sep16_scaffold_359_10
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8919..9752
DNA (834bp) protein (278aa)
High-affinity phosphate transport protein (ABC superfamily, atp_bind) Tax=Methylacidiphilum fumariolicum SolV RepID=I0JXT6_9BACT
pstB; phosphate ABC transporter ATPase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3_30_b2_sep16_scaffold_359_11
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9839..10525
DNA (687bp) protein (229aa)
phosphate uptake regulator, PhoU Tax=Verrucomicrobium spinosum RepID=UPI0001745E5D
PhoU family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM3_30_b2_sep16_scaffold_359_12
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

10583..12910
DNA (2328bp) protein (776aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI000378C1E3
ppk; polyphosphate kinase
PLM3_30_b2_sep16_scaffold_359_13
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12907..13596
DNA (690bp) protein (230aa)
ROK family protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GF52_NITSI
ROK family protein
ROK family protein {ECO:0000313|EMBL:AEJ02276.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
PLM3_30_b2_sep16_scaffold_359_14
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

13608..14069
DNA (462bp) protein (154aa)
phosphohistidine phosphatase, SixA (EC:3.1.3.-)
Phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:CCW35280.1}; EC=3.1.3.- {ECO:0000313|EMBL:CCW35280.1};; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Phosphohistidine phosphatase, SixA Tax=Chthonomonas calidirosea T49 RepID=S0EY85_9BACT
PLM3_30_b2_sep16_scaffold_359_15
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14088..14501)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SSN3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK91977.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_359_16
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14658..16124)
DNA (1467bp) protein (489aa)
Subtilisin-like serine protease Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QCK6_9FIRM
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_30_b2_sep16_scaffold_359_17
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16102..16692)
DNA (591bp) protein (197aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF80_THET1
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RBG_16_RIF_CHLX_72_14_curated
Displaying 17 items

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