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PLM3_30_b2_sep16_scaffold_2498

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_2498_1
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(129..1001)
DNA (873bp) protein (291aa)
RNA polymerase sigma24 factor Tax=Frankia sp. Iso899 RepID=UPI0003B4800E
ECF subfamily RNA polymerase sigma-24 subunit
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:CCK29201.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM3_30_b2_sep16_scaffold_2498_2
unknown

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1149..1376
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_2498_3
unknown

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1373..1657
DNA (285bp) protein (95aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_2498_4
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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comp(1667..2119)
DNA (453bp) protein (151aa)
50S ribosomal protein L9 Tax=Nocardiopsis chromatogenes RepID=UPI00034813DB
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_30_b2_sep16_scaffold_2498_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(2116..2388)
DNA (273bp) protein (91aa)
30S ribosomal protein S18 Tax=Frankia RepID=RS18_FRASN
rpsR; 30S ribosomal protein S18
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_2498_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(2378..2827)
DNA (450bp) protein (150aa)
single-stranded DNA-binding protein Tax=Salinispora pacifica RepID=UPI000370F823
single-strand binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_2498_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(2892..3167)
DNA (276bp) protein (92aa)
Ribosomal protein S6 (Fragment) Tax=mine drainage metagenome RepID=T1CTF6_9ZZZZ
30S ribosomal protein S6
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_2498_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3381..4166
DNA (786bp) protein (262aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
3-methyl-2-oxobutanoate hydroxymethyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_2498_9
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4369..5118)
DNA (750bp) protein (250aa)
hypothetical protein Tax=Frankia sp. BCU110501 RepID=UPI00036BAE99
Alpha/beta hydrolase {ECO:0000313|EMBL:KFF98184.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_2498_10

Not on your lists

5376..6029
DNA (654bp) protein (218aa)
Cyclase family protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8T6_SPHTD
Marine sediment metagenome DNA, contig: S01H1_S02614 {ECO:0000313|EMBL:GAF97302.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cyclase family protein
PLM3_30_b2_sep16_scaffold_2498_11
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(6097..6705)
DNA (609bp) protein (203aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037BBEBC
dienelactone hydrolase
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_30_b2_sep16_scaffold_2498_12
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6920..7480)
DNA (561bp) protein (187aa)
Riboflavin biosynthesis protein ribD (EC:1.1.1.193)
Deaminase-reductase domain-containing protein Tax=Rhodococcus opacus M213 RepID=K8X8I2_RHOOP
Deaminase-reductase domain-containing protein {ECO:0000313|EMBL:EKT77111.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
PLM3_30_b2_sep16_scaffold_2498_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

7799..9037
DNA (1239bp) protein (413aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI0003821D3C
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_2498_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9037..10359
DNA (1323bp) protein (441aa)
membrane protein Tax=Streptomyces sp. Wigar10 RepID=UPI000307490A
membrane protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_2498_15
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10364..11176
DNA (813bp) protein (271aa)
Integral membrane protein-like protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWJ6_ACIC1
integral membrane protein-like protein
Integral membrane protein-like protein {ECO:0000313|EMBL:ABK53806.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Displaying 15 items

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