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PLM3_30_b2_sep16_scaffold_180

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_180_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1..999
DNA (999bp) protein (333aa)
proteasome accessory factor C Tax=Ornithinimicrobium pekingense RepID=UPI0003B433F7
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1109..1429
DNA (321bp) protein (107aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1468..1689
DNA (222bp) protein (74aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1787..2395
DNA (609bp) protein (203aa)
Putative twin-arginine translocation protein TatB Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CLC7_MYXFH
putative twin-arginine translocation protein TatB
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2406..3191
DNA (786bp) protein (262aa)
Sec-independent protein translocase protein TatC Tax=Frankia sp. QA3 RepID=I8QGJ6_9ACTO
Sec-independent protein translocase TatC
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3203..3946
DNA (744bp) protein (248aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3943..4677
DNA (735bp) protein (245aa)
Alpha/beta hydrolase fold protein Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U943_OCEP5
alpha/beta hydrolase fold protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4730..7384
DNA (2655bp) protein (885aa)
RNA helicase Tax=Actinomadura atramentaria RepID=UPI00035DB6A3
DSH domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

7433..8362
DNA (930bp) protein (310aa)
Diacylglycerol kinase catalytic region Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C641_SPHTD
diacylglycerol kinase catalytic domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_10
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8359..9459
DNA (1101bp) protein (367aa)
peptidase M24 Tax=Streptomyces RepID=UPI00037948D2
Putative dipeptidase PepE {ECO:0000313|EMBL:EPJ41231.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
peptidase
PLM3_30_b2_sep16_scaffold_180_11
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9535..10422
DNA (888bp) protein (296aa)
hypothetical protein Tax=Streptomyces RepID=UPI000368B163
Uncharacterized protein {ECO:0000313|EMBL:AKH81290.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_180_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(10457..11851)
DNA (1395bp) protein (465aa)
cysteine--tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJN5_9CHLR
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(11881..13728)
DNA (1848bp) protein (616aa)
AAA ATPase, central domain protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUD4_ROSS1
ATPase central domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_14
unknown

Not on your lists

13838..14452
DNA (615bp) protein (205aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_180_15
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14449..14910)
DNA (462bp) protein (154aa)
Transcriptional regulator, AsnC family Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q813_CATAD
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACU74180.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3_30_b2_sep16_scaffold_180_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15071..15754
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Pseudomonas aeruginosa BL14 RepID=U8JTN2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ETU81045.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
Reverse transcriptase (RNA-dependent DNA polymerase)
PLM3_30_b2_sep16_scaffold_180_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

15814..17325
DNA (1512bp) protein (504aa)
Amidohydrolase 3 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A658_NATTJ
amidohydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

17652..18008
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=Frankia sp. QA3 RepID=I9A1H7_9ACTO
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

18469..20070
DNA (1602bp) protein (534aa)
apolipoprotein N-acyltransferase (EC:2.4.1.83)
Apolipoprotein N-acyltransferase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B0K3_FRADG
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_20
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

20662..21501
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=Capitella teleta RepID=R7VL19_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU17891.1, ECO:0000313|EnsemblMetazoa:CapteP214207}; species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_180_21
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(21578..22066)
DNA (489bp) protein (163aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(22314..23831)
DNA (1518bp) protein (506aa)
glycine dehydrogenase subunit beta (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYJ5_9FIRM
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_23
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(23828..25153)
DNA (1326bp) protein (442aa)
Probable glycine dehydrogenase [decarboxylating] subunit 1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WXJ0_ALIAD
gcvPA; glycine dehydrogenase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_24
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(25217..25588)
DNA (372bp) protein (124aa)
hypothetical protein bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_25
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(25585..26034)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Actinomyces sp. oral taxon 170 str. F0386 RepID=F3PAI3_9ACTO
transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_26
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

26296..26733
DNA (438bp) protein (146aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_27
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(26738..27217)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2P824_9ACTO
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_28
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(27265..27888)
DNA (624bp) protein (208aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8) bin=bin8_Chloro species=Faecalibacterium prausnitzii genus=Faecalibacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
HGPRTase: hypoxanthine phosphoribosyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_180_29
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(27911..28444)
DNA (534bp) protein (178aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATQ1_RUBXD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 29 items

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