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PLM3_5_b1_sep16_scaffold_643

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_643_1
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..790
DNA (789bp) protein (263aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI000382A2C5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH98032.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM3_5_b1_sep16_scaffold_643_2
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

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823..1179
DNA (357bp) protein (119aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI00017468C8
Tax=RBG_16_Zixibacteria_48_11_curated
PLM3_5_b1_sep16_scaffold_643_3
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1236..3599)
DNA (2364bp) protein (788aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:KJL26300.1}; EC=2.7.3.9 {ECO:0000313|EMBL:KJL26300.1};; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ptsP_1; phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XPN5_PROPF
PLM3_5_b1_sep16_scaffold_643_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3673..4314)
DNA (642bp) protein (214aa)
PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL {ECO:0000313|EMBL:KJQ56039.1}; EC=2.7.-.- {ECO:0000313|EMBL:KJQ56039.1};; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Uncharacterized protein Tax=Microbacterium maritypicum MF109 RepID=T5KTF2_9MICO
dihydroxyacetone kinase
PLM3_5_b1_sep16_scaffold_643_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4319..5317)
DNA (999bp) protein (333aa)
dihydroxyacetone kinase subunit DhaK (EC:2.7.1.29)
Dihydroxyacetone kinase, DhaK subunit {ECO:0000313|EMBL:AEA25172.1}; EC=2.7.1.29 {ECO:0000313|EMBL:AEA25172.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
dihydroxyacetone kinase subunit K Tax=Curtobacterium ginsengisoli RepID=UPI0003B32CED
PLM3_5_b1_sep16_scaffold_643_6
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5382..6494)
DNA (1113bp) protein (371aa)
High-affinity nickel-transport protein Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G811_9PSEU
High-affinity nickel-transport protein {ECO:0000313|EMBL:EOD67533.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
nixA; high-affinity nickel-transport protein
PLM3_5_b1_sep16_scaffold_643_7
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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6632..7129
DNA (498bp) protein (166aa)
Ferric uptake regulator, Fur family Tax=Frankia sp. (strain CcI3) RepID=Q2J9L9_FRASC
ferric uptake regulator family protein
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ABD12023.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM3_5_b1_sep16_scaffold_643_8
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7126..8622)
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Two-component system histidine kinase MprB Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XIX2_MICPN
mprB; two-component system histidine kinase MprB
PLM3_5_b1_sep16_scaffold_643_9
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8619..9314)
DNA (696bp) protein (232aa)
Two-component system response regulator MprA Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XIX3_MICPN
mprA; two-component system response regulator MprA
Two-component system response regulator MprA {ECO:0000313|EMBL:BAK33299.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_643_10
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9348..10739)
DNA (1392bp) protein (464aa)
Putative FAD-binding protein Tax=Sinorhizobium fredii USDA 257 RepID=I3XEU3_RHIFR
FAD-binding protein
Putative FAD-binding protein {ECO:0000313|EMBL:AFL54399.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
PLM3_5_b1_sep16_scaffold_643_11
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10752..11525)
DNA (774bp) protein (258aa)
Putative phosphatase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XIF6_MICPN
phosphatase
Putative phosphatase {ECO:0000313|EMBL:BAK35825.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_643_12
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11665..12357
DNA (693bp) protein (231aa)
Two component transcriptional regulator, winged helix family Tax=Arthrobacter sp. (strain FB24) RepID=A0AWD4_ARTS2
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABK05704.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
PLM3_5_b1_sep16_scaffold_643_13
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12390..13814)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
Uncharacterized protein Tax=Arthrobacter sp. AK-YN10 RepID=U2A3Z1_9MICC
periplasmic sensor signal transduction histidine kinase
PLM3_5_b1_sep16_scaffold_643_14
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

13889..15451
DNA (1563bp) protein (521aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XGX1_MICPN
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_67_18
PLM3_5_b1_sep16_scaffold_643_15
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15321..16682)
DNA (1362bp) protein (454aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Artificial two-component regulatory system sensor kinase Tax=Patulibacter medicamentivorans RepID=H0E3K2_9ACTN
integral membrane sensor signal transduction histidine kinase
PLM3_5_b1_sep16_scaffold_643_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16660..18219)
DNA (1560bp) protein (520aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000363177B
DNA-binding response regulator TcrA {ECO:0000313|EMBL:EHN11756.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
two component transcriptional regulator
PLM3_5_b1_sep16_scaffold_643_17
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(18385..18597)
DNA (213bp) protein (71aa)
low molecular weight protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine phosphatase Tax=Propionibacterium sp. HGH0353 RepID=S3X1N8_9ACTO
Protein-tyrosine phosphatase {ECO:0000313|EMBL:EPH04804.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
PLM3_5_b1_sep16_scaffold_643_18
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18601..18990)
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XIY7_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33313.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_643_19
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18987..19748)
DNA (762bp) protein (254aa)
precorrin-6A reductase (EC:1.3.1.54)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003680D29
Cobalt-precorrin-6x reductase {ECO:0000313|EMBL:KGN36799.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
PLM3_5_b1_sep16_scaffold_643_20
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(20085..20642)
DNA (558bp) protein (186aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003805711
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
cobalamin biosynthesis protein CobD
PLM3_5_b1_sep16_scaffold_643_21
unknown

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20648..20785
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 21 items

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