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PLM3_5_b1_sep16_scaffold_2429

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_2429_1
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..526)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XTJ7_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK37446.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_2429_2
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(633..1508)
DNA (876bp) protein (292aa)
D-tagatose 3-epimerase {ECO:0000313|EMBL:KJL31520.1}; EC=5.3.1.- {ECO:0000313|EMBL:KJL31520.1};; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein Tax=Microbacterium barkeri RepID=UPI0002E9AA42
xylose isomerase domain-containing protein
PLM3_5_b1_sep16_scaffold_2429_3
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1527..2648)
DNA (1122bp) protein (374aa)
lsrC; Autoinducer 2 import system permease protein lsrC (EC:3.6.3.17)
Autoinducer 2 import system permease protein lsrC {ECO:0000313|EMBL:AEV83346.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEV83346.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
Autoinducer 2 import system permease protein lsrC Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZE6_ACTS5
PLM3_5_b1_sep16_scaffold_2429_4
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2645..3679)
DNA (1035bp) protein (345aa)
Putative ABC transporter permease protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H7I2_ACTM4
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAL88969.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM3_5_b1_sep16_scaffold_2429_5
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(3676..5181)
DNA (1506bp) protein (502aa)
Ribose ABC transporter (ATP-binding protein) Tax=Modestobacter marinus (strain BC501) RepID=I4F5D4_MODMB
rbsA; ribose ABC transporter ATP-binding protein
Ribose ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:CCH90847.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM3_5_b1_sep16_scaffold_2429_6
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5343..6380)
DNA (1038bp) protein (346aa)
Autoinducer 2-binding protein lsrB Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZE9_ACTS5
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD78674.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
Autoinducer 2-binding protein lsrB
PLM3_5_b1_sep16_scaffold_2429_7
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6523..7818)
DNA (1296bp) protein (432aa)
rhaB; rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase {ECO:0000313|EMBL:BAK33986.1}; EC=2.7.1.5 {ECO:0000313|EMBL:BAK33986.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Rhamnulokinase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XMR3_MICPN
PLM3_5_b1_sep16_scaffold_2429_8
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7815..9851)
DNA (2037bp) protein (679aa)
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase {ECO:0000313|EMBL:ABK73634.1}; EC=1.1.1.1 {ECO:0000313|EMBL:ABK73634.1};; EC=4.1.2.19 {ECO:0000313|EMBL:ABK73634.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;"
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QQ13_MYCS2
short-chain dehydrogenase
PLM3_5_b1_sep16_scaffold_2429_9
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9858..10007)
DNA (150bp) protein (50aa)
rhaA; L-rhamnose isomerase (EC:5.3.1.14)
Putative L-rhamnose isomerase {ECO:0000313|EMBL:BAK33981.1}; EC=5.3.1.14 {ECO:0000313|EMBL:BAK33981.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
rhamnose isomerase Tax=Humibacter albus RepID=UPI0003B5EF02
PLM3_5_b1_sep16_scaffold_2429_10
unknown

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10156..10410
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_2429_11
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11401..11910
DNA (510bp) protein (170aa)
LacI family transcriptional regulator Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XMQ6_MICPN
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:BAK33979.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_2429_12
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11920..13497
DNA (1578bp) protein (526aa)
ramA; alpha-L-rhamnosidase (EC:3.2.1.40)
Alpha-L-rhamnosidase {ECO:0000313|EMBL:BAK33980.1}; EC=3.2.1.40 {ECO:0000313|EMBL:BAK33980.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Alpha-L-rhamnosidase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XMQ7_MICPN
Displaying 12 items

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