ggKbase home page

PLM3_5_b1_sep16_scaffold_3770

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_3770_1
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24..863
DNA (840bp) protein (280aa)
Abortive infection protein Tax=Frankia sp. CN3 RepID=G6H6E0_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ62038.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus stellifer.;"
PLM3_5_b1_sep16_scaffold_3770_2
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(943..1872)
DNA (930bp) protein (310aa)
Thioredoxin Tax=Micromonospora lupini str. Lupac 08 RepID=I0L9C2_9ACTO
Thioredoxin {ECO:0000313|EMBL:CCH20419.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
thioredoxin
PLM3_5_b1_sep16_scaffold_3770_3
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2010..2759)
DNA (750bp) protein (250aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000381E046
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB29808.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_5_b1_sep16_scaffold_3770_4
unknown

Not on your lists

comp(2877..3308)
DNA (432bp) protein (144aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_3770_5
unknown

Not on your lists

3313..3837
DNA (525bp) protein (175aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_3770_6
unknown

Not on your lists

3815..4372
DNA (558bp) protein (186aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_3770_7
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4396..5142
DNA (747bp) protein (249aa)
Peptidase C60 sortase A and B Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PXG1_KRIFD
peptidase C60 sortase A and B
Peptidase C60 sortase A and B {ECO:0000313|EMBL:ADB29809.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_5_b1_sep16_scaffold_3770_8
unknown

Not on your lists

comp(5183..5404)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_3770_9
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5445..5615)
DNA (171bp) protein (57aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
Helicase Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2T3Z4_9NOCA
Helicase IV
PLM3_5_b1_sep16_scaffold_3770_10
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5612..7522)
DNA (1911bp) protein (637aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
Superfamily I DNA and RNA helicase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAD1_STRRD
superfamily I DNA and RNA helicase-like protein
PLM3_5_b1_sep16_scaffold_3770_11
unknown

Not on your lists

comp(7656..7823)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_3770_12
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8028..8363
DNA (336bp) protein (112aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SHG7_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV83016.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM3_5_b1_sep16_scaffold_3770_13
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8372..8803
DNA (432bp) protein (144aa)
HTH-type transcriptional regulator hmrR Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SHG6_ACTS5
HTH-type transcriptional regulator hmrR
HTH-type transcriptional regulator hmrR {ECO:0000313|EMBL:AEV83015.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM3_5_b1_sep16_scaffold_3770_14
unknown

Not on your lists

8787..9023
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_3770_15
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9002..9577)
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Rhodococcus sp. (strain RHA1) RepID=Q0SA27_RHOSR
Deaminase/reductase {ECO:0000313|EMBL:AII03648.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_3770_16
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9796..10644
DNA (849bp) protein (283aa)
Putative uncharacterized protein Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HAU0_STRPR
Putative uncharacterized protein {ECO:0000313|EMBL:EDY63951.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
aminoglycoside phosphotransferase
PLM3_5_b1_sep16_scaffold_3770_17
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10739..10933)
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KHA76018.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
Displaying 17 items

View Taxonomy