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PLM3_5_b1_sep16_scaffold_1683

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_1683_1
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1019)
DNA (1017bp) protein (339aa)
integrase Tax=Ornithinimicrobium pekingense RepID=UPI0003B588AD
integrase
Integrase family protein {ECO:0000313|EMBL:ADU46575.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM3_5_b1_sep16_scaffold_1683_2
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1025..1258)
DNA (234bp) protein (78aa)
DNA binding domain protein, excisionase family Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SDX3_INTC7
Uncharacterized protein {ECO:0000313|EMBL:KGN38940.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
excisionase family DNA binding domain-containing protein
PLM3_5_b1_sep16_scaffold_1683_3
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1570..2382)
DNA (813bp) protein (271aa)
Helix-turn-helix domain protein Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WBK1_KINRD
XRE family transcriptional regulator {ECO:0000313|EMBL:KHO24708.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium setense.;"
helix-turn-helix domain-containing protein
PLM3_5_b1_sep16_scaffold_1683_4
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

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2647..3579
DNA (933bp) protein (311aa)
Alcohol dehydrogenase GroES domain protein Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WBK0_KINRD
alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ABS04189.1}; species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
PLM3_5_b1_sep16_scaffold_1683_5
unknown

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comp(3528..4097)
DNA (570bp) protein (190aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_1683_6
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4288..4719
DNA (432bp) protein (144aa)
Cupin domain-containing protein Tax=Gordonia polyisoprenivorans RepID=H6MXL5_GORPV
cupin domain-containing protein
Putative uncharacterized protein {ECO:0000313|EMBL:GAB23263.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans NBRC 16320 = JCM 10675.;"
PLM3_5_b1_sep16_scaffold_1683_7
Thermoanaerobacter mathranii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4785..5777)
DNA (993bp) protein (331aa)
aldehyde oxidase Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B69F67
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ADH60493.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3).;"
PLM3_5_b1_sep16_scaffold_1683_8
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5849..6616)
DNA (768bp) protein (256aa)
Putative Levodione reductase Tax=Streptomyces afghaniensis 772 RepID=S4NMA3_9ACTO
short chain dehydrogenase/reductase oxidoreductase
Oxidoreductase, short-chain dehydrogenase/reductase family {ECO:0000313|EMBL:ABF89492.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM3_5_b1_sep16_scaffold_1683_9
Corynebacterium matruchotii, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6685..7041)
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=Corynebacterium matruchotii ATCC 14266 RepID=E0DET7_9CORY
Uncharacterized protein {ECO:0000313|EMBL:EFM48655.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium matruchotii ATCC 14266.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_1683_10
unknown

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comp(7720..8442)
DNA (723bp) protein (241aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_1683_11
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8967..9230
DNA (264bp) protein (88aa)
hypothetical protein Tax=Kocuria sp. UCD-OTCP RepID=UPI000382C36B
Uncharacterized protein {ECO:0000313|EMBL:KHD96723.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
PLM3_5_b1_sep16_scaffold_1683_12
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9391..9870)
DNA (480bp) protein (160aa)
Ion transport 2 domain-containing protein Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TGQ7_AMYOR
ion transport 2 domain-containing protein
Ion transporter {ECO:0000313|EMBL:KFZ79718.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
PLM3_5_b1_sep16_scaffold_1683_13
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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10422..11642
DNA (1221bp) protein (407aa)
Putative low-affinity inorganic phosphate transporter Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XHB2_MICPN
pit; low-affinity inorganic phosphate transporter
Putative low-affinity inorganic phosphate transporter {ECO:0000313|EMBL:BAK38120.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_1683_14
unknown

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11642..11725
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 14 items

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