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PLM3_5_b1_sep16_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_38_1
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..232
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L3F2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH18349.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_38_2
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

448..1029
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UDX7_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC47121.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM3_5_b1_sep16_scaffold_38_3
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1051..3483)
DNA (2433bp) protein (811aa)
ligD; DNA ligase D (EC:6.5.1.1)
DNA ligase D {ECO:0000313|EMBL:BAK33495.1}; EC=6.5.1.1 {ECO:0000313|EMBL:BAK33495.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
DNA ligase D Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJZ9_MICPN
PLM3_5_b1_sep16_scaffold_38_4
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3567..4505
DNA (939bp) protein (313aa)
Probable DNA repair protein CMN_02035 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BBP4_9MICO
putative DNA repair protein
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
PLM3_5_b1_sep16_scaffold_38_5
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4541..4759
DNA (219bp) protein (73aa)
hypothetical protein Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B6628E
Uncharacterized protein {ECO:0000313|EMBL:KJK12612.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_38_6
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4821..5726)
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XHC4_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK38132.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_38_7
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6048..8150
DNA (2103bp) protein (701aa)
agaA; hypothetical protein (EC:3.2.1.22)
AgaA protein Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B6A0_9MICO
Alpha-galactosidase {ECO:0000313|EMBL:AJW77974.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
PLM3_5_b1_sep16_scaffold_38_8
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8166..9026)
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK04_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33500.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_38_9
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9045..9908)
DNA (864bp) protein (288aa)
panC; pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003725710
PLM3_5_b1_sep16_scaffold_38_10
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9905..10786)
DNA (882bp) protein (294aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK06_MICPN
PLM3_5_b1_sep16_scaffold_38_11
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10949..11374)
DNA (426bp) protein (142aa)
Putative AsnC-family transcriptional regulator Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q826R1_STRAW
AsnC family transcriptional regulator {ECO:0000313|EMBL:KHD97064.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
transcription regulator AsnC
PLM3_5_b1_sep16_scaffold_38_12
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11454..12464
DNA (1011bp) protein (337aa)
NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC:3.5.3.18)
NG,NG-dimethylarginine dimethylaminohydrolase 1 {ECO:0000313|EMBL:CCA55248.1}; EC=3.5.3.18 {ECO:0000313|EMBL:CCA55248.1};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
NG,NG-dimethylarginine dimethylaminohydrolase 1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RJN8_STRVP
PLM3_5_b1_sep16_scaffold_38_13
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12461..13690
DNA (1230bp) protein (410aa)
ornithine-oxoacid aminotransferase Tax=Actinoplanes globisporus RepID=UPI0003755318
putative ornithine aminotransferase
Putative ornithine aminotransferase {ECO:0000313|EMBL:AGZ45829.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_5_b1_sep16_scaffold_38_14
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13775..14440
DNA (666bp) protein (222aa)
Methyltransferase type 12 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PKZ7_KRIFD
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ADB32464.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_5_b1_sep16_scaffold_38_15
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14550..14951
DNA (402bp) protein (134aa)
tagD; glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39)
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:BAK33503.1}; EC=2.7.7.39 {ECO:0000313|EMBL:BAK33503.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Glycerol-3-phosphate cytidylyltransferase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK07_MICPN
PLM3_5_b1_sep16_scaffold_38_16
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15231..15767
DNA (537bp) protein (179aa)
sodium:proton antiporter Tax=Glaciibacter superstes RepID=UPI0003B72036
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK35069.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_38_17
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15780..16052
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0V131_MYCFO
Rho termination factor {ECO:0000313|EMBL:CDP84502.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
Rho termination factor
PLM3_5_b1_sep16_scaffold_38_18
unknown

Not on your lists

16219..16554
DNA (336bp) protein (112aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_38_19
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16849..17718
DNA (870bp) protein (290aa)
Uncharacterized protein Tax=Bacillus sp. EGD-AK10 RepID=U1YYA9_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ERI40113.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
Natural resistance-associated macrophage protein
PLM3_5_b1_sep16_scaffold_38_20
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17770..17970
DNA (201bp) protein (67aa)
hypothetical protein Tax=Cellulomonas sp. JC225 RepID=UPI00030CE06F
Uncharacterized protein {ECO:0000313|EMBL:KFD44086.1}; species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
PLM3_5_b1_sep16_scaffold_38_21
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18438..20747
DNA (2310bp) protein (770aa)
glycosyl hydrolase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626D64
Putative beta-glucosidase {ECO:0000313|EMBL:GAF47720.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
Beta-glucosidase B
PLM3_5_b1_sep16_scaffold_38_22
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20758..22125)
DNA (1368bp) protein (456aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
Two-component system histidine kinase Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IHK0_9PSEU
two-component system histidine kinase
PLM3_5_b1_sep16_scaffold_38_23
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22122..22775)
DNA (654bp) protein (218aa)
transcriptional regulator Tax=Amycolatopsis benzoatilytica RepID=UPI00035DB290
DNA-binding response regulator PrrA {ECO:0000313|EMBL:EWM13856.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
Two-component system, response regulator of the winged helix family
PLM3_5_b1_sep16_scaffold_38_24
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23017..24150
DNA (1134bp) protein (378aa)
Putative oxidoreductase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK09_MICPN
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK33505.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_38_25
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24176..26719
DNA (2544bp) protein (848aa)
Phosphoenolpyruvate synthase family protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK10_MICPN
phosphoenolpyruvate synthase
Phosphoenolpyruvate synthase family protein {ECO:0000313|EMBL:BAK33506.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_38_26
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26716..27339
DNA (624bp) protein (208aa)
3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Putative 3-methyladenine DNA glycosylase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK11_MICPN
PLM3_5_b1_sep16_scaffold_38_27
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27432..28304)
DNA (873bp) protein (291aa)
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ECF subfamily RNA polymerase sigma-24 subunit
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:AGZ40327.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_5_b1_sep16_scaffold_38_28
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28455..29810)
DNA (1356bp) protein (452aa)
Oxidoreductase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK12_MICPN
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:BAK33508.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_38_29
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30136..31041
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK13_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33509.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_38_30
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31153..31614
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK22_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33518.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Displaying items 1-30 of 49 in total

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