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PLM3_5_b1_sep16_scaffold_193

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_193_1
unknown

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comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_193_2
Vibrio shilonii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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606..1625
DNA (1020bp) protein (340aa)
Maltose regulon regulatory protein MalI Tax=Vibrio shilonii AK1 RepID=A6CUZ9_9VIBR
Maltose regulon regulatory protein MalI {ECO:0000313|EMBL:EDL55755.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio shilonii AK1.;"
LacI family transcriptional regulator
PLM3_5_b1_sep16_scaffold_193_3
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1657..3270
DNA (1614bp) protein (538aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
CoA-transferase Tax=Rhodococcus opacus RepID=UPI00029CD4B9
Uncharacterized protein ydiF
PLM3_5_b1_sep16_scaffold_193_4
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3284..4903
DNA (1620bp) protein (540aa)
alanine-phosphoribitol ligase Tax=Ruania albidiflava RepID=UPI0003B5F163
Alanine-phosphoribitol ligase {ECO:0000313|EMBL:ESZ10704.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
dehydrogenase
PLM3_5_b1_sep16_scaffold_193_5
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4900..5703
DNA (804bp) protein (268aa)
hypothetical protein Tax=Leeia oryzae RepID=UPI00035F1548
Enoyl-CoA hydratase {ECO:0000313|EMBL:AKE59903.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
putative enoyl-CoA hydratase/isomerase
PLM3_5_b1_sep16_scaffold_193_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5741..7252
DNA (1512bp) protein (504aa)
Betaine aldehyde dehydrogenase GbsA {ECO:0000313|EMBL:EYR80606.1}; EC=1.2.1.8 {ECO:0000313|EMBL:EYR80606.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
NADP-dependent L-sorbosone dehydrogenase protein (EC:1.2.1.-)
hypothetical protein Tax=actinobacterium SCGC AAA044-N04 RepID=UPI00035FA23D
PLM3_5_b1_sep16_scaffold_193_7
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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7264..8409
DNA (1146bp) protein (382aa)
hypothetical protein Tax=actinobacterium SCGC AAA044-N04 RepID=UPI0003664876
glycosyl hydrolase family protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3_5_b1_sep16_scaffold_193_8
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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8406..9062
DNA (657bp) protein (219aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:4.1.2.14)
2-keto-3-deoxy-phosphogluconate aldolase Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI0003796031
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000313|EMBL:EID71765.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
PLM3_5_b1_sep16_scaffold_193_9
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9059..10015
DNA (957bp) protein (319aa)
2-dehydro-3-deoxygluconokinase Tax=Burkholderia oklahomensis RepID=UPI00016A44FD
pfkB carbohydrate kinase family protein
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:AIO67688.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
PLM3_5_b1_sep16_scaffold_193_10
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10012..11577
DNA (1566bp) protein (522aa)
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:CKI10658.1}; EC=1.1.99.3 {ECO:0000313|EMBL:CKI10658.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis.;"
Dehydrogenase Tax=Rhodococcus opacus M213 RepID=K8Y1N1_RHOOP
dehydrogenase
PLM3_5_b1_sep16_scaffold_193_11
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(11722..12168)
DNA (447bp) protein (149aa)
Putative MarR family transcriptional regulator Tax=Gordonia rhizosphera NBRC 16068 RepID=K6W664_9ACTO
Putative MarR family transcriptional regulator {ECO:0000313|EMBL:GAB89191.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
MarR family transcriptional regulator
PLM3_5_b1_sep16_scaffold_193_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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12250..12780
DNA (531bp) protein (177aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0003641E3A
Uncharacterized protein {ECO:0000313|EMBL:ETW95789.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_193_13
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

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comp(12798..13445)
DNA (648bp) protein (216aa)
NADP oxidoreductase, coenzyme F420-dependent; K06988 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Rudaea cellulosilytica genus=Rudaea taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative NADP oxidoreductase, coenzyme F420-dependent
Tax=RBG_16_Zixibacteria_48_11_curated
PLM3_5_b1_sep16_scaffold_193_14
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(13456..14469)
DNA (1014bp) protein (338aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00035E6A58
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AHF92805.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
PLM3_5_b1_sep16_scaffold_193_15
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(14627..16027)
DNA (1401bp) protein (467aa)
hypothetical protein Tax=Longispora albida RepID=UPI000362217F
FAD-linked oxidase {ECO:0000313|EMBL:KJY30639.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
FAD linked oxidase
PLM3_5_b1_sep16_scaffold_193_16
unknown

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comp(16447..17178)
DNA (732bp) protein (244aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036E2B5E
PLM3_5_b1_sep16_scaffold_193_17
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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17305..19278
DNA (1974bp) protein (658aa)
Putative two-component system histidine kinase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJL7_MICPN
two-component system histidine kinase
Putative two-component system histidine kinase {ECO:0000313|EMBL:BAK35917.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_5_b1_sep16_scaffold_193_18
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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19275..19700
DNA (426bp) protein (142aa)
Two-component system response regulator Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJL6_MICPN
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:BAK35916.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Displaying 18 items

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