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PLM3_60_b1_sep16_scaffold_584

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_584_1
unknown

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1..162
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_584_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

334..1104
DNA (771bp) protein (257aa)
ispU; Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2) (Di-trans,poly-cis-decaprenylcistransferase 2) (Undecaprenyl diphosphate synthase 2) (UDS 2) (EC:2.5.1.31)
Isoprenyl transferase bin=GWA2_Elusimicrobia_69_24 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_b1_sep16_scaffold_584_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1147..1899
DNA (753bp) protein (251aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000362450C
Uncharacterized protein {ECO:0000313|EMBL:ETW92585.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
oxidoreductase
PLM3_60_b1_sep16_scaffold_584_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1893..2804)
DNA (912bp) protein (304aa)
hypothetical protein Tax=Actinopolyspora halophila RepID=UPI0003703643
transcriptional regulator
Transcriptional regulatory protein {ECO:0000313|EMBL:BAL13987.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
PLM3_60_b1_sep16_scaffold_584_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

2865..4082
DNA (1218bp) protein (406aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
yqjV-like MFS-type transporter
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_b1_sep16_scaffold_584_6
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4128..5567
DNA (1440bp) protein (480aa)
Amidohydrolase family Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q095I4_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KIJ77837.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
amidohydrolase family
PLM3_60_b1_sep16_scaffold_584_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5583..7946
DNA (2364bp) protein (788aa)
coxL2; carbon-monoxide dehydrogenase large subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase large subunit Tax=Rhizobium sp. (strain NGR234) RepID=C3KNL3_RHISN
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_b1_sep16_scaffold_584_8
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8042..9331)
DNA (1290bp) protein (430aa)
Putative serine/threonine protein kinase Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NDQ4_KITSK
putative serine/threonine protein kinase
Putative serine/threonine protein kinase {ECO:0000313|EMBL:BAJ29335.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM3_60_b1_sep16_scaffold_584_9
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9459..10388
DNA (930bp) protein (310aa)
Uncharacterized protein Tax=Cupriavidus sp. HMR-1 RepID=L2EF50_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKZ97960.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
Permease of the drug/metabolite transporter (DMT) superfamily
PLM3_60_b1_sep16_scaffold_584_10
unknown

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10636..10749
DNA (114bp) protein (38aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_584_11
unknown

Not on your lists

10754..11221
DNA (468bp) protein (156aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_584_12
unknown

Not on your lists

comp(11361..11609)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_584_13
unknown

Not on your lists

comp(11621..12115)
DNA (495bp) protein (165aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_584_14
unknown

Not on your lists

comp(12488..13162)
DNA (675bp) protein (225aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_584_15
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(13367..13906)
DNA (540bp) protein (180aa)
alias=16ft_combo_ws3_scaffold_11273_12 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_60_b1_sep16_scaffold_584_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13986..14375)
DNA (390bp) protein (130aa)
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_b1_sep16_scaffold_584_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14539..15003
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4Y0_GEOOG
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_b1_sep16_scaffold_584_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

15119..15499
DNA (381bp) protein (127aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen bin=GWA2_Methylomirabilis_73_35 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_b1_sep16_scaffold_584_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15496..16851)
DNA (1356bp) protein (452aa)
Major facilitator superfamily (MFS) transporter Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRJ8_KORVE
major facilitator superfamily transporter
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_60_b1_sep16_scaffold_584_20
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(16851..19016)
DNA (2166bp) protein (722aa)
Trehalose synthase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I807_CALAS
treS; trehalose synthase
Trehalose synthase {ECO:0000313|EMBL:BAM01395.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_60_b1_sep16_scaffold_584_21

Not on your lists

comp(19151..19414)
DNA (264bp) protein (88aa)
Thiol oxidoreductase-like protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITK0_KORVE
Uncharacterized protein {ECO:0000313|EMBL:AIA17926.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
thiol oxidoreductase-like
PLM3_60_b1_sep16_scaffold_584_22
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19395..20525)
DNA (1131bp) protein (377aa)
Thiol oxidoreductase-like protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022G6_SOLUE
thiol oxidoreductase-like protein
Tax=RBG_16_Gamma2_60_9_curated
PLM3_60_b1_sep16_scaffold_584_23
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22690..23151)
DNA (462bp) protein (154aa)
Hypothetical signal peptide protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89ET5_BRADU
signal peptide protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ67638.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
PLM3_60_b1_sep16_scaffold_584_trna_1
unknown

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comp(23777..23850)
DNA (74bp)
transferRNA Lys
PLM3_60_b1_sep16_scaffold_584_24
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

23916..24206
DNA (291bp) protein (97aa)
arc; proteasome-associated ATPase (EC:3.6.-.-)
Proteasome-associated ATPase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A280_9ACTN
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; Proteasome-associated ATPase {ECO:0000256|SAAS:SAAS00216588}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
PLM3_60_b1_sep16_scaffold_584_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(24187..24507)
DNA (321bp) protein (107aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_b1_sep16_scaffold_584_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24524..25849)
DNA (1326bp) protein (442aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase bin=GWA2_Methylomirabilis_73_35 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_b1_sep16_scaffold_584_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(25842..27146)
DNA (1305bp) protein (435aa)
hisZ; ATP phosphoribosyltransferase regulatory subunit bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hisZ; ATP phosphoribosyltransferase regulatory subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_b1_sep16_scaffold_584_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(27143..27667)
DNA (525bp) protein (175aa)
Phosphoglycerate mutase bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphoglycerate mutase
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 29 items

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