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PLM3_60_b1_sep16_scaffold_3750

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_3750_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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2..526
DNA (525bp) protein (175aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Queuine tRNA-ribosyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PI91_9BACT
PLM3_60_b1_sep16_scaffold_3750_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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526..852
DNA (327bp) protein (109aa)
Preprotein translocase, subunit YajC Tax=Candidatus Nitrospira defluvii RepID=D8PI90_9BACT
yajC; preprotein translocase subunit YajC
Preprotein translocase, subunit YajC {ECO:0000313|EMBL:CBK42977.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_3750_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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888..2531
DNA (1644bp) protein (548aa)
Protein translocase subunit SecD Tax=Candidatus Nitrospira defluvii RepID=D8PI89_9BACT
secD; protein-export membrane protein SecD
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_3750_4
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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2614..3531
DNA (918bp) protein (306aa)
Protein-export membrane protein SecF Tax=Candidatus Nitrospira defluvii RepID=D8PI88_9BACT
secF; protein-export membrane protein SecF
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_3750_5
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(3682..4431)
DNA (750bp) protein (250aa)
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM3_60_b1_sep16_scaffold_3750_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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4669..7533
DNA (2865bp) protein (955aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK42974.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase Tax=Candidatus Nitrospira defluvii RepID=D8PI87_9BACT
PLM3_60_b1_sep16_scaffold_3750_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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7493..7819
DNA (327bp) protein (109aa)
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase Tax=Candidatus Nitrospira defluvii RepID=D8PI87_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_3750_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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7816..8010
DNA (195bp) protein (65aa)
Fis family transcriptional regulator Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B054
sigma-54 dependent transcriptional regulator
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_3750_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7992..9059
DNA (1068bp) protein (356aa)
Fis family transcriptional regulator Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B054
sigma-54 dependent transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 9 items

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